Insertion junction: LMJ.RY0402.237685_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.237685
Chromosome:chromosome 10
Location:2910879
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g440200 SMC5B (1 of 2) PTHR19306:SF1 - STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5; Structural Maintenance of Chromosomes protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCAAGGAGATCGGCTGTGCGGGCGAGGTG
Internal bar code:CTAGCGTCTGGACCAAGCGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:499
LEAP-Seq percent confirming:99.2857
LEAP-Seq n confirming:139
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGTTAGTCCTGATGGCT
Suggested primer 2:ACATGCCCAATCACTTCACA