Insertion junction: LMJ.RY0402.238007_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.238007
Chromosome:chromosome 1
Location:4119752
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGTCCGGGAGCAGCAGCTCCACGTCGG
Internal bar code:TGTTGTGTTAGGATCTAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1230
LEAP-Seq percent confirming:97.9221
LEAP-Seq n confirming:10556
LEAP-Seq n nonconfirming:224
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGTTGGCCTTGAGCTAT
Suggested primer 2:TCAATGGTGTTGGTGGTTGT