Insertion junction: LMJ.RY0402.238007_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.238007
Chromosome:chromosome 1
Location:4119757
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g027150 CPLD46,HEL5 Conserved in the plant lineage and diatoms; (1 of 2) PTHR24031//PTHR24031:SF249 - RNA HELICASE // ATP-DEPENDENT DNA HELICASE RECG CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTCGATGCTACATCCACTGTGGATGAG
Internal bar code:TGTTGTAGAGGTTGCTCCGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:97.9781
LEAP-Seq n confirming:13084
LEAP-Seq n nonconfirming:270
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGTTGGCCTTGAGCTAT
Suggested primer 2:TCAATGGTGTTGGTGGTTGT