Insertion junction: LMJ.RY0402.239520_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.239520
Chromosome:chromosome 9
Location:7154056
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g412000 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACGTCATGGCGGCATCAAGCGCCACAA
Internal bar code:GAATTATCGTGTGCCGCAACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:525
LEAP-Seq percent confirming:99.4885
LEAP-Seq n confirming:389
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAAAAGAGAATCGCAGC
Suggested primer 2:TTCCCATTTCTCGTGTCTCC