Insertion junction: LMJ.RY0402.243719_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.243719
Chromosome:chromosome 4
Location:2254531
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g220200 (1 of 1) PTHR16254:SF13 - K(+) EFFLUX ANTIPORTER 1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGAGCAAACACGCCGGCACTTCTCCG
Internal bar code:GTGGCGGACTTGGGCAAAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:563
LEAP-Seq percent confirming:98.6346
LEAP-Seq n confirming:1806
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTAGCTGGAGTGGGAGTTG
Suggested primer 2:TGCTGACTTGTGTGCTTTCC