Insertion junction: LMJ.RY0402.246868_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.246868
Chromosome:chromosome 2
Location:1629976
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre02.g085257 COP4,CHR2,CSOB Channelrhodopsin 2; (1 of 1) IPR001425//IPR029730 - Archaeal/bacterial/fungal rhodopsin // Archaeal/bacterial/fungal rhodopsin-like 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATCAAGCCGCCCTTCCGTTCGGACGATGC
Internal bar code:CGCCAGAGTGCGCGTCAAGGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:131
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GTCCGGCGTGTTAATCAAGT
Suggested primer 2:GGTATACCGGTAGGGTGGCT