Insertion junction: LMJ.RY0402.251495_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.251495
Chromosome:chromosome 3
Location:1888773
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g155001 ISA1,STA7 (1 of 1) PTHR10357:SF169 - ISOAMYLASE 1, CHLOROPLASTIC; Isoamylase, starch debranching enzyme 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATATCCTGGCATACCACCTCATCCCCCCCT
Internal bar code:AGAAGGCCAAACCGTCATGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:97
LEAP-Seq percent confirming:96.8208
LEAP-Seq n confirming:335
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGTTTCCAGAAGGTTGT
Suggested primer 2:GGAAATGGAGAAGGAGGAGG