Insertion junction: LMJ.RY0402.254881_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.254881
Chromosome:chromosome 6
Location:6168269
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre06.g290400 HDA5 (1 of 1) PTHR10625:SF104 - HISTONE DEACETYLASE 6; RPD3/HDA1 type histone deacetylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGAAGGATCCCGGAGACAGATACGTT
Internal bar code:AGTGCACCCCACGAGGTAACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:94.6381
LEAP-Seq n confirming:353
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTTCCTTAGACTCCAAC
Suggested primer 2:CCAAGGGCAGGAAGATTACA