Gene: Cre01.g002150
Overview
| Common name: | |
| Defline: | (1 of 5) IPR023220 - Type IV secretion system, VirB5-domain |
| Description: | |
| Synonyms: | g49.t1,Cre01.g002150.t1.1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g002150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g002150-Venus-3xFLAG
Imaged strain: CSI_LW03A12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
cytosol/cytosol (weak signal)
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002662_1 | CLIP2.002662 | intron | 80 | 6.1 |
| CLIP2.002662_2 | CLIP2.002662 | intron | 80 | 6.1 |
| CLIP2.003123_1 | CLIP2.003123 | CDS | 80 | 6.1 |
| CLIP2.003123_2 | CLIP2.003123 | CDS | 80 | 6.1 |
| CLIP2.005211_1 | CLIP2.005211 | 3'UTR | 80 | 6.1 |
| CLIP2.005211_2 | CLIP2.005211 | 3'UTR | 80 | 6.1 |
| CLIP2.006883_1 | CLIP2.006883 | CDS | 80 | 6.1 |
| CLIP2.006883_2 | CLIP2.006883 | CDS | 80 | 6.1 |
| CLIP2.007768_1 | CLIP2.007768 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.109189_1 | LMJ.RY0402.109189 | 5'UTR | 73 | 5.5 |
| LMJ.RY0402.173547_1 | LMJ.RY0402.173547 | intron | 73 | 5.5 |
| LMJ.RY0402.177463_1 | LMJ.RY0402.177463 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.177463_2 | LMJ.RY0402.177463 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.211596_1 | LMJ.RY0402.211596 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.239472_1 | LMJ.RY0402.239472 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.251204_1 | LMJ.RY0402.251204 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.255883_2 | LMJ.RY0402.255883 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | |
| PANTHER: | |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.