Gene: Cre01.g002300
Overview
| Common name: | CYN4,CYN19B,CYN19-2,ROC1 |
| Defline: | (1 of 4) K01802 - peptidylprolyl isomerase (E5.2.1.8); Cyclophilin 19-2 |
| Description: | Peptidyl-prolyl cis-trans isomerase (rotamase), cyclophilin type; identical to AF5226 CYP1; cytosolic; similar to At4g38740 (ROC1, AtCYP18-3) and At2g21130+ (AtCYP19-2); found in the flagellar proteome; Similar to Radial Spoke Protein RSP12 |
| Synonyms: | CYN19-2,CYN4,g56.t1,ROC1,Cre01.g002300.t1.1 |
| Chromosome: | chromosome 1 |
Protein Localization
A plasmid for expressing Cre01.g002300 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre01.g002300-Venus-3xFLAG
Imaged strain: CSI_LW09G3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
nucleus/nucleolus
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.024345_1 | CLIP2.024345 | intron | 80 | 6.1 |
| CLIP2.024345_2 | CLIP2.024345 | intron | 80 | 6.1 |
| CLIP2.048149_1 | CLIP2.048149 | CDS | 80 | 6.1 |
| CLIP2.048149_2 | CLIP2.048149 | CDS | 80 | 6.1 |
| CLIP2.059599_1 | CLIP2.059599 | 3'UTR | 80 | 6.1 |
| CLIP2.059599_2 | CLIP2.059599 | 3'UTR | 80 | 6.1 |
| CLIP2.076327_1 | CLIP2.076327 | 5'UTR | 80 | 6.1 |
| CLIP2.076327_2 | CLIP2.076327 | 5'UTR | 80 | 6.1 |
| CLIP2.078586_1 | CLIP2.078586 | 3'UTR | 80 | 6.1 |
| CLIP2.078586_2 | CLIP2.078586 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.069874_1 | LMJ.RY0402.069874 | intron | 58 | 5.5 |
| LMJ.RY0402.202796_1 | LMJ.RY0402.202796 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00160 |
| PANTHER: | PTHR11071 |
| KEGG_ec: | EC:5.2.1.8 |
| KEGG_orthology: | K01802 |
| KOG: | KOG0865 |
| Gene ontology terms:: | GO:0000413, GO:0003755, GO:0006457 |
| Best arabidopsis TAIR name: | AT2G21130 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.