Gene: Cre03.g171350
Overview
| Common name: | SEC61A |
| Defline: | SEC61-alpha subunit of ER-translocon; (1 of 1) K10956 - protein transport protein SEC61 subunit alpha (SEC61A) |
| Description: | Expressed Protein. Similar to Sec61-alpha, subunit of the ER-protein translocase. |
| Synonyms: | g3531.t1,Cre03.g171350.t1.1 |
| Chromosome: | chromosome 3 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC1H12
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
secretory pathway/endoplasmic reticulum
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.012658_1 | CLIP2.012658 | intron | 80 | 6.1 |
| CLIP2.012658_2 | CLIP2.012658 | intron | 80 | 6.1 |
| CLIP2.060081_1 | CLIP2.060081 | 3'UTR | 80 | 6.1 |
| CLIP2.060081_2 | CLIP2.060081 | 3'UTR | 80 | 6.1 |
| CLIP2.066714_1 | CLIP2.066714 | 3'UTR | 80 | 6.1 |
| CLIP2.070360_1 | CLIP2.070360 | 3'UTR | 80 | 6.1 |
| CLIP2.070360_2 | CLIP2.070360 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.227773_1 | LMJ.RY0402.227773 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.253543_1 | LMJ.RY0402.253543 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00344, PF10559 |
| PANTHER: | PTHR10906 |
| KEGG_ec: | |
| KEGG_orthology: | K10956 |
| KOG: | KOG1373 |
| Gene ontology terms:: | GO:0015031, GO:0016020 |
| Best arabidopsis TAIR name: | AT2G34250 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | SecY protein transport family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.