| Common name: | PUS1,PUS21,CBF5 |
| Defline: | TruB family RNA pseudouridine synthase; (1 of 1) K11131 - H/ACA ribonucleoprotein complex subunit 4 (DKC1, NOLA4, CBF5) |
| Description: | Also known as Centromere/microtubule binding protein, Centromere binding factor 5; belongs to TruB family of tRNA pseudouridylate synthases; Homologue of AtNAP57 and yeast CBF5, pseudouridine synthases involved in rRNA biogenesis and localized in the nucleolus (TruB) [PMID: 11833778]; ts-lethal mutant was isolated (PMID 29743196) |
| Synonyms: | g3566.t1,Cre03.g172950.t1.1,CBF5,PUS21,PUS1 |
| Chromosome: | chromosome 3 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.007403_1 | CLIP2.007403 | outside_mRNA | 80 | 6.1 |
| CLIP2.035094_1 | CLIP2.035094 | 3'UTR | 80 | 6.1 |
| CLIP2.060868_1 | CLIP2.060868 | 3'UTR | 80 | 6.1 |
| CLIP2.063191_1 | CLIP2.063191 | 3'UTR | 80 | 6.1 |
| CLIP2.065716_1 | CLIP2.065716 | 3'UTR | 80 | 6.1 |
| CLIP2.065716_2 | CLIP2.065716 | 3'UTR | 80 | 6.1 |
| CLIP2.067469_1 | CLIP2.067469 | 3'UTR | 80 | 6.1 |
| CLIP2.067469_2 | CLIP2.067469 | 3'UTR | 80 | 6.1 |
| CLIP2.071467_1 | CLIP2.071467 | 3'UTR | 80 | 6.1 |
| CLIP2.076364_1 | CLIP2.076364 | 5'UTR | 80 | 6.1 |
| CLIP2.076364_2 | CLIP2.076364 | 5'UTR | 80 | 6.1 |
| PFAM: | PF01472, PF01509, PF08068, PF16198 |
| PANTHER: | PTHR23127 |
| KEGG_ec: | EC:5.4.99.25 |
| KEGG_orthology: | K11131 |
| KOG: | KOG2529 |
| Gene ontology terms:: | GO:0001522, GO:0003723, GO:0006396, GO:0009451, GO:0009982 |
| Best arabidopsis TAIR name: | AT3G57150 |
| Best arabidopsis TAIR symbol: | AtCBF5,AtNAP57,CBF5,NAP57 |
| Best arabidopsis TAIR defline: | homologue of NAP57 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.