Gene: Cre05.g239000

Overview

Common name:
Defline:(1 of 1) IPR006626//IPR011050//IPR011989//IPR012334 - Parallel beta-helix repeat // Pectin lyase fold/virulence factor // Armadillo-like helical // Pectin lyase fold
Description:
Synonyms:g5511.t1
Chromosome:chromosome 5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.033531_1 CLIP2.033531 intron 80 6.1
CLIP2.033531_2 CLIP2.033531 intron 80 6.1
CLIP2.037776_1 CLIP2.037776 CDS 80 6.1
CLIP2.037776_2 CLIP2.037776 CDS 80 6.1
CLIP2.038649_1 CLIP2.038649 CDS 80 6.1
CLIP2.038649_2 CLIP2.038649 CDS 80 6.1
CLIP2.050349_1 CLIP2.050349 CDS 80 6.1
CLIP2.050349_2 CLIP2.050349 CDS 80 6.1
CLIP2.052166_1 CLIP2.052166 CDS 80 6.1
CLIP2.054169_2 CLIP2.054169 CDS 63 6.1
CLIP2.055331_1 CLIP2.055331 intron 80 6.1
CLIP2.055331_2 CLIP2.055331 intron 80 6.1
LMJ.RY0402.070482_1 LMJ.RY0402.070482 intron 73 5.5
LMJ.RY0402.168101_1 LMJ.RY0402.168101 intron 73 5.5
LMJ.RY0402.197384_1 LMJ.RY0402.197384 CDS 73 5.5
LMJ.RY0402.197979_1 LMJ.RY0402.197979 3'UTR 95 5.5
LMJ.RY0402.197979_2 LMJ.RY0402.197979 3'UTR 95 5.5
LMJ.RY0402.211267_1 LMJ.RY0402.211267 CDS 73 5.5
LMJ.RY0402.213508_1 LMJ.RY0402.213508 CDS 95 5.5
LMJ.RY0402.213508_2 LMJ.RY0402.213508 CDS 95 5.5
LMJ.RY0402.235381_2 LMJ.RY0402.235381 5'UTR 73 5.5
LMJ.RY0402.235811_1 LMJ.RY0402.235811 CDS 73 5.5

Gene Annotations

PFAM:PF13229
PANTHER: PTHR32093 PTHR32093:SF18
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT003D02, screen 1 of 1 ( 73% confidence (FDR = 0.27))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.