| Common name: | CWC22 |
| Defline: | (1 of 1) K13100 - pre-mRNA-splicing factor CWC22 (CWC22); Cwc22 pre-mRNA splicing factor |
| Description: | high sequence similarity to putative cwc22 pre-mRNA splicing factor in Oryza sativa; shares MIF4G and MA3 domains in common with eIF4g. Contains alpha-helical MIF4G and MA3 domains, occurring in eIF4g, NM, D2p, CBP80; and MA3, DAP-5, respectively. |
| Synonyms: | CWC22,Cre06.g259800.t1.1,g5840.t1 |
| Chromosome: | chromosome 6 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.020289_1 | CLIP2.020289 | intron | 80 | 6.1 |
| CLIP2.058766_1 | CLIP2.058766 | 5'UTR | 80 | 6.1 |
| CLIP2.058766_2 | CLIP2.058766 | 5'UTR | 80 | 6.1 |
| CLIP2.062287_1 | CLIP2.062287 | 3'UTR | 80 | 6.1 |
| CLIP2.062287_2 | CLIP2.062287 | 3'UTR | 80 | 6.1 |
| CLIP2.066203_1 | CLIP2.066203 | 3'UTR | 40 | 6.1 |
| CLIP2.066815_1 | CLIP2.066815 | 3'UTR | 80 | 6.1 |
| CLIP2.066815_2 | CLIP2.066815 | 3'UTR | 80 | 6.1 |
| CLIP2.071752_1 | CLIP2.071752 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.071609_2 | LMJ.RY0402.071609 | intron | 58 | 5.5 |
| LMJ.RY0402.165885_1 | LMJ.RY0402.165885 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.199487_1 | LMJ.RY0402.199487 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.212321_2 | LMJ.RY0402.212321 | CDS | 95 | 5.5 |
| LMJ.RY0402.235358_1 | LMJ.RY0402.235358 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.235358_2 | LMJ.RY0402.235358 | CDS | 58 | 5.5 |
| PFAM: | PF02847, PF02854 |
| PANTHER: | PTHR18034 PTHR18034:SF3 |
| KEGG_ec: | |
| KEGG_orthology: | K13100 |
| KOG: | KOG2140 |
| Gene ontology terms:: | GO:0003723, GO:0005488, GO:0005515 |
| Best arabidopsis TAIR name: | AT1G80930 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | MIF4G domain-containing protein / MA3 domain-containing protein |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.