Gene: Cre06.g298850

Overview

Common name:	LTH6
Defline:	LAT2 homolog
Description:	Belongs to a family of 7 highly similar genes (5 adjacent on chr10), conserved in Volvox
Synonyms:	Cre06.g298850.t1.1,g6913.t1
Chromosome:	chromosome 6

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.019390_1	CLIP2.019390	CDS	80	6.1
CLIP2.019390_2	CLIP2.019390	CDS	80	6.1
CLIP2.022884_1	CLIP2.022884	intron	80	6.1
CLIP2.022884_2	CLIP2.022884	intron	80	6.1
CLIP2.030462_1	CLIP2.030462	intron	80	6.1
CLIP2.030462_2	CLIP2.030462	intron	80	6.1
CLIP2.034404_1	CLIP2.034404	intron	80	6.1
CLIP2.034404_2	CLIP2.034404	intron	80	6.1
CLIP2.047251_1	CLIP2.047251	CDS	80	6.1
CLIP2.047251_2	CLIP2.047251	CDS	80	6.1
CLIP2.055746_2	CLIP2.055746	CDS	80	6.1
CLIP2.055746_3	CLIP2.055746	CDS	80	6.1
CLIP2.065890_1	CLIP2.065890	CDS	80	6.1
CLIP2.065890_2	CLIP2.065890	CDS	80	6.1
LMJ.RY0402.045316_1	LMJ.RY0402.045316	CDS	73	5.5
LMJ.RY0402.054112_1	LMJ.RY0402.054112	intron	95	5.5
LMJ.RY0402.054112_2	LMJ.RY0402.054112	intron	95	5.5
LMJ.RY0402.101353_1	LMJ.RY0402.101353	3'UTR	95	5.5
LMJ.RY0402.101353_2	LMJ.RY0402.101353	3'UTR	95	5.5
LMJ.RY0402.113375_1	LMJ.RY0402.113375	5'UTR	95	5.5
LMJ.RY0402.113375_2	LMJ.RY0402.113375	intron	95	5.5
LMJ.RY0402.130150_1	LMJ.RY0402.130150	3'UTR	73	5.5
LMJ.RY0402.205780_1	LMJ.RY0402.205780	CDS	73	5.5
LMJ.RY0402.215535_2	LMJ.RY0402.215535	3'UTR	73	5.5
LMJ.RY0402.237256_1	LMJ.RY0402.237256	3'UTR	73	5.5

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

LAT003D02, screen 1 of 1 ( 99% confidence (FDR = 0.00094))

LAT007G11, screen 1 of 1 ( 99% confidence (FDR = 5.8e-07))

LAT034H07, screen 1 of 1 ( 94% confidence (FDR = 0.055))

LAT035H07, screen 1 of 1 ( 97% confidence (FDR = 0.027))

LAT041D11, screen 1 of 1 ( 77% confidence (FDR = 0.23))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.