Gene: Cre09.g394750
Overview
| Common name: | PRPS1 |
| Defline: | (1 of 2) PTHR10724 - S1 RNA-BINDING DOMAIN-CONTAINING PROTEIN 1; Chloroplast Ribosomal Protein S1 |
| Description: | imported to chloroplast; Chloroplast Small Ribosomal Subunit Protein S1. This is a polyribonucleotide nucleotidyltransferase (see PNK series) |
| Synonyms: | g9395.t1,Cre09.g394750.t1.1 |
| Chromosome: | chromosome 9 |
Protein Localization
A plasmid for expressing Cre09.g394750 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre09.g394750-Venus-3xFLAG
Imaged strain: CSI_LW06E8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001328_3 | CLIP2.001328 | 5'UTR | 40 | 6.1 |
| CLIP2.003378_1 | CLIP2.003378 | 3'UTR | 80 | 6.1 |
| CLIP2.003378_2 | CLIP2.003378 | 3'UTR | 80 | 6.1 |
| CLIP2.003835_1 | CLIP2.003835 | 3'UTR | 80 | 6.1 |
| CLIP2.003835_2 | CLIP2.003835 | 3'UTR | 80 | 6.1 |
| CLIP2.004640_1 | CLIP2.004640 | 3'UTR | 80 | 6.1 |
| CLIP2.006349_1 | CLIP2.006349 | 3'UTR | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00575 |
| PANTHER: | PTHR10724 PTHR10724:SF7 |
| KEGG_ec: | |
| KEGG_orthology: | K02945 |
| KOG: | |
| Gene ontology terms:: | GO:0003676, GO:0003723, GO:0003735, GO:0005840, GO:0006412 |
| Best arabidopsis TAIR name: | AT5G30510 |
| Best arabidopsis TAIR symbol: | ARRPS1,RPS1 |
| Best arabidopsis TAIR defline: | ribosomal protein S1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.