Gene: Cre09.g396400
Overview
| Common name: | UBQ2 |
| Defline: | Bi-ubiquitin; (1 of 1) K12158 - ubiquitin-like protein Nedd8 (NEDD8) |
| Description: | post-translationally modifies protein to tag them for proteasome-mediated degradation, internalization etc..; contains two ubiquitin domains in tandem |
| Synonyms: | Cre09.g396400.t1.1,UBQ2,g9361.t1 |
| Chromosome: | chromosome 9 |
Protein Localization
The plasmid for this gene is not available.
Imaged strain: CSI_FC2A01
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.
Classification(s):
cytosol/cytosol (strong signal)
nucleus/nucleoplasm
secretory pathway/plasma membrane or cell wall
If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.
 |
| Venus Venus+Chlorophyll |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.058772_1 | CLIP2.058772 | 5'UTR | 80 | 6.1 |
| CLIP2.058772_2 | CLIP2.058772 | 5'UTR | 80 | 6.1 |
| CLIP2.062414_1 | CLIP2.062414 | 3'UTR_intron | 80 | 6.1 |
| CLIP2.076789_1 | CLIP2.076789 | intron | 63 | 6.1 |
| LMJ.RY0402.124524_1 | LMJ.RY0402.124524 | 3'UTR | 58 | 5.5 |
| LMJ.RY0402.205393_2 | LMJ.RY0402.205393 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.256551_1 | LMJ.RY0402.256551 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00240, PF11976 |
| PANTHER: | PTHR10666 |
| KEGG_ec: | |
| KEGG_orthology: | K12158 |
| KOG: | KOG0005 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT1G31340 |
| Best arabidopsis TAIR symbol: | ATRUB1,NEDD8,RUB1 |
| Best arabidopsis TAIR defline: | related to ubiquitin 1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.