Gene: Cre12.g526883

Overview

Common name:
Defline:(1 of 18) PF12906 - RING-variant domain (RINGv)
Description:
Synonyms:Cre12.g526900.t2.1,g12982.t2
Chromosome:chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.017140_1 CLIP2.017140 CDS 80 6.1
CLIP2.017140_2 CLIP2.017140 CDS 80 6.1
CLIP2.018102_1 CLIP2.018102 intron 80 6.1
CLIP2.018102_2 CLIP2.018102 intron 80 6.1
CLIP2.033492_1 CLIP2.033492 CDS 80 6.1
CLIP2.033492_2 CLIP2.033492 CDS 80 6.1
CLIP2.039758_1 CLIP2.039758 intron 80 6.1
CLIP2.039758_2 CLIP2.039758 intron 80 6.1
CLIP2.050792_1 CLIP2.050792 CDS 80 6.1
CLIP2.050792_2 CLIP2.050792 CDS 80 6.1
LMJ.RY0402.075297_1 LMJ.RY0402.075297 CDS|outside_mRNA 73 5.5
LMJ.RY0402.126118_3 LMJ.RY0402.126118 CDS|outside_mRNA 73 5.5
LMJ.RY0402.148558_1 LMJ.RY0402.148558 CDS|outside_mRNA 95 5.5
LMJ.RY0402.148558_2 LMJ.RY0402.148558 CDS|outside_mRNA 95 5.5
LMJ.RY0402.155897_1 LMJ.RY0402.155897 CDS 73 5.5
LMJ.RY0402.156375_1 LMJ.RY0402.156375 intron|outside_mRNA 95 5.5
LMJ.RY0402.156375_2 LMJ.RY0402.156375 intron|outside_mRNA 95 5.5
LMJ.RY0402.158662_2 LMJ.RY0402.158662 CDS|outside_mRNA 73 5.5
LMJ.RY0402.232738_1 LMJ.RY0402.232738 CDS|outside_mRNA 95 5.5
LMJ.RY0402.232738_2 LMJ.RY0402.232738 CDS|outside_mRNA 95 5.5
LMJ.RY0402.232969_1 LMJ.RY0402.232969 intron|outside_mRNA 73 5.5
LMJ.RY0402.237244_2 LMJ.RY0402.237244 intron|outside_mRNA 73 5.5

Gene Annotations

PFAM:PF12906
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::GO:0008270
Best arabidopsis TAIR name:AT5G60580.2, AT5G60580.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:RING/U-box superfamily protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Photosynthesis or light sensitivity, screen 4 of 12 ( 92% confidence (FDR = 0.076))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.