Gene: Cre12.g531150
Overview
| Common name: | XYI1 |
| Defline: | (1 of 1) 2.7.1.15//5.3.1.5 - Ribokinase // Xylose isomerase / D-xylose ketoisomerase; ribokinase |
| Description: | |
| Synonyms: | g13073.t1,XYI1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g531150 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g531150-Venus-3xFLAG
Imaged strain: CSI_LW12A11
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/a few medium crescent structures in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.018092_1 | CLIP2.018092 | intron | 80 | 6.1 |
| CLIP2.018092_2 | CLIP2.018092 | intron | 80 | 6.1 |
| CLIP2.022130_1 | CLIP2.022130 | CDS | 80 | 6.1 |
| CLIP2.022130_2 | CLIP2.022130 | CDS | 80 | 6.1 |
| CLIP2.035981_1 | CLIP2.035981 | CDS | 80 | 6.1 |
| CLIP2.035981_2 | CLIP2.035981 | CDS | 80 | 6.1 |
| CLIP2.036182_1 | CLIP2.036182 | CDS | 80 | 6.1 |
| CLIP2.036182_2 | CLIP2.036182 | CDS | 80 | 6.1 |
| CLIP2.051427_1 | CLIP2.051427 | intron | 80 | 6.1 |
| CLIP2.051427_2 | CLIP2.051427 | intron | 80 | 6.1 |
| LMJ.RY0402.059493_1 | LMJ.RY0402.059493 | CDS | 73 | 5.5 |
| LMJ.RY0402.066542_1 | LMJ.RY0402.066542 | intron | 73 | 5.5 |
| LMJ.RY0402.080671_2 | LMJ.RY0402.080671 | CDS | 73 | 5.5 |
| LMJ.RY0402.154130_2 | LMJ.RY0402.154130 | intron | 73 | 5.5 |
| LMJ.RY0402.157161_1 | LMJ.RY0402.157161 | 5'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00294, PF01261 |
| PANTHER: | PTHR10584 PTHR10584:SF166 |
| KEGG_ec: | EC:2.7.1.15 |
| KEGG_orthology: | |
| KOG: | KOG2855 |
| Gene ontology terms:: | GO:0004747, GO:0006014 |
| Best arabidopsis TAIR name: | AT1G17160.1 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | pfkB-like carbohydrate kinase family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.