Gene: Cre13.g573900
Overview
| Common name: | NSS3 |
| Defline: | (1 of 1) PTHR11819//PTHR11819:SF159 - SODIUM/SOLUTE SYMPORTER // SUBFAMILY NOT NAMED; Sodium:solute symporter |
| Description: | Sodium:solute symporter. Resembles a Na+/pantothenate symporter, but solute may actually be thiamine |
| Synonyms: | Cre13.g573900.t1.1,g14108.t1,NSS3 |
| Chromosome: | chromosome 13 |
Protein Localization
A plasmid for expressing Cre13.g573900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre13.g573900-Venus-3xFLAG
Imaged strain: CSI_LW10E10
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/a few medium puncta|vesicles in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre02.g097800 | HLA3,MRP1 | Cre13.g573900 | NSS3 | Mackinder et al. 2017 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.031337_1 | CLIP2.031337 | intron | 80 | 6.1 |
| CLIP2.031337_2 | CLIP2.031337 | intron | 80 | 6.1 |
| CLIP2.038011_1 | CLIP2.038011 | intron | 80 | 6.1 |
| CLIP2.038011_2 | CLIP2.038011 | intron | 80 | 6.1 |
| CLIP2.047253_1 | CLIP2.047253 | intron | 80 | 6.1 |
| CLIP2.048638_1 | CLIP2.048638 | CDS | 80 | 6.1 |
| CLIP2.048638_2 | CLIP2.048638 | CDS | 80 | 6.1 |
| CLIP2.052670_1 | CLIP2.052670 | CDS | 80 | 6.1 |
| CLIP2.052670_2 | CLIP2.052670 | CDS | 80 | 6.1 |
| CLIP2.063951_1 | CLIP2.063951 | 3'UTR | 80 | 6.1 |
| CLIP2.063951_2 | CLIP2.063951 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.079184_1 | LMJ.RY0402.079184 | intron | 73 | 5.5 |
| LMJ.RY0402.106903_1 | LMJ.RY0402.106903 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.106903_2 | LMJ.RY0402.106903 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00474 |
| PANTHER: | PTHR11819 PTHR11819:SF159 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG2349 |
| Gene ontology terms:: | GO:0005215, GO:0006810, GO:0016020, GO:0055085 |
| Best arabidopsis TAIR name: | |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.