Gene: Cre16.g678100 (Genome version: v5.5)
Overview
| Common name: | VPS28 |
| Defline: | Subunit of the ESCRT-I complex |
| Description: | Component of the ESCRT-I protein complex, involved in ubiquitin-mediated internalization of proteins into multi-vesicular bodies (late endosomes); expressed Protein. Similar to VPS28, a component of the ESCRT-I protein complex, involved in ubiquitin-media |
| Synonyms: | g16553.t1,Cre16.g678100.t1.1,VPS28 |
| Chromosome: | chromosome_16 |
Protein Localization
A plasmid for expressing Cre16.g678100 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g678100-Venus-3xFLAG
Imaged strain: CSI_LW10D5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.115353_1 | LMJ.RY0402.115353 | sense | 3'UTR | 73 |
Gene Annotations
| PFAM: | PF03997 |
| PANTHER: | PTHR12937 |
| KEGG_ec: | |
| KEGG_orthology: | K12184 |
| KOG: | KOG3284 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G05000.1 |
| Best arabidopsis TAIR symbol: | VPS28-1,VPS28-2 |
| Best arabidopsis TAIR defline: | Vacuolar protein sorting-associated protein VPS28 family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.