Gene: Cre16.g678100
Overview
| Common name: | VPS28 |
| Defline: | (1 of 1) K12184 - ESCRT-I complex subunit VPS28 (VPS28); Subunit of the ESCRT-I complex |
| Description: | Component of the ESCRT-I protein complex, involved in ubiquitin-mediated internalization of proteins into multi-vesicular bodies (late endosomes); expressed Protein. Similar to VPS28, a component of the ESCRT-I protein complex, involved in ubiquitin-mediated internalization of proteins into multi-vesicular bodies (late endosomes) |
| Synonyms: | VPS28,Cre16.g678100.t1.1,g16553.t1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g678100 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g678100-Venus-3xFLAG
Imaged strain: CSI_LW10D5
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002076_1 | CLIP2.002076 | 3'UTR | 80 | 6.1 |
| CLIP2.002076_2 | CLIP2.002076 | 3'UTR | 80 | 6.1 |
| CLIP2.003368_1 | CLIP2.003368 | 3'UTR | 80 | 6.1 |
| CLIP2.003368_2 | CLIP2.003368 | 3'UTR | 80 | 6.1 |
| CLIP2.005010_1 | CLIP2.005010 | 3'UTR | 80 | 6.1 |
| CLIP2.005010_2 | CLIP2.005010 | 3'UTR | 80 | 6.1 |
| CLIP2.057206_2 | CLIP2.057206 | 3'UTR | 80 | 6.1 |
| CLIP2.057206_3 | CLIP2.057206 | 3'UTR | 80 | 6.1 |
| CLIP2.057845_1 | CLIP2.057845 | intron | 40 | 6.1 |
| CLIP2.073280_2 | CLIP2.073280 | intron | 63 | 6.1 |
| LMJ.RY0402.115353_1 | LMJ.RY0402.115353 | 3'UTR | 73 | 5.5 |
Gene Annotations
| PFAM: | PF03997 |
| PANTHER: | PTHR12937 PTHR12937:SF0 |
| KEGG_ec: | |
| KEGG_orthology: | K12184 |
| KOG: | KOG3284 |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT4G05000 |
| Best arabidopsis TAIR symbol: | VPS28-1,VPS28-2 |
| Best arabidopsis TAIR defline: | Vacuolar protein sorting-associated protein VPS28 family protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.