| Common name: | SYP5 |
| Defline: | Qc-SNARE protein, Syn8/Syntaxin8-family; (1 of 1) K08503 - syntaxin of plants SYP5 (SYP5) |
| Description: | Qc-SNARE protein, Syx8/Syntaxin8-family. Expressed Protein. Involved in Golgi/Late Endosomal (lysosome/vacuole) trafficking. Class Qc.III.c SNARE, targeted to late endosomes (PMID: 17596510). Previously annotated as SYP5 |
| Synonyms: | Cre17.g709350.t1.1,g17182.t1 |
| Chromosome: | chromosome 17 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001239_2 | CLIP2.001239 | CDS | 80 | 6.1 |
| CLIP2.001239_3 | CLIP2.001239 | CDS | 80 | 6.1 |
| CLIP2.001771_1 | CLIP2.001771 | 3'UTR | 80 | 6.1 |
| CLIP2.001771_2 | CLIP2.001771 | 3'UTR | 80 | 6.1 |
| CLIP2.003933_1 | CLIP2.003933 | 3'UTR | 80 | 6.1 |
| CLIP2.003933_2 | CLIP2.003933 | 3'UTR | 80 | 6.1 |
| CLIP2.004549_1 | CLIP2.004549 | intron | 63 | 6.1 |
| CLIP2.005077_2 | CLIP2.005077 | 5'UTR | 80 | 6.1 |
| CLIP2.007067_1 | CLIP2.007067 | intron | 80 | 6.1 |
| CLIP2.007067_2 | CLIP2.007067 | intron | 80 | 6.1 |
| CLIP2.007230_1 | CLIP2.007230 | intron | 80 | 6.1 |
| LMJ.RY0402.053801_1 | LMJ.RY0402.053801 | 3'UTR | 73 | 5.5 |
| LMJ.RY0402.103259_1 | LMJ.RY0402.103259 | intron | 73 | 5.5 |
| PFAM: | PF05739 |
| PANTHER: | PTHR19957 PTHR19957:SF119 |
| KEGG_ec: | |
| KEGG_orthology: | K08503 |
| KOG: | KOG3202 |
| Gene ontology terms:: | GO:0005515 |
| Best arabidopsis TAIR name: | AT1G16240 |
| Best arabidopsis TAIR symbol: | ATSYP51,SYP51 |
| Best arabidopsis TAIR defline: | syntaxin of plants 51 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.