Insertion junction: CLIP2.000830_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.000830
Chromosome:chromosome 12
Location:2484316
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g507300 LCI30 (1 of 1) K14842 - ribosome biogenesis protein NSA2 (NSA2); Low-CO2-inducible protein 30 3'UTR
Cre12.g507350 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTCAGCGCTGGCATCCAGCTCTTGCAAGGAGGGGGTCACCTGCACAAT
Internal bar code:GATCGGGGGCACGTTGCACGTC

Confirmation - LEAP-Seq

LEAP-Seq distance:3122
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGCTGGTAAAATGCGATG
Suggested primer 2:TGTTAGGGACGCACAAGGAC