Insertion junction: CLIP2.002067_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.002067
Chromosome:chromosome 12
Location:2149955
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g509600 CDD2 (1 of 1) K15441 - tRNA-specific adenosine deaminase 2 [EC:3.5.4.-] (TAD2, ADAT2); Cytosine deaminase 5'UTR
Cre12.g509650 PDS1,PDS (1 of 1) K02293 - 15-cis-phytoene desaturase (PDS, crtP); phytoene desaturase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAAGCGACGTTGCCTTCATGCAGCCACTCACTTGAATTGTCAGTTACCT
Internal bar code:GTGGTTTTTTGCAGCTCCTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:2266
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GAGATGTCGAGCCTTACCCG
Suggested primer 2:TCCAGAACGATTGGGTGGTG