Insertion junction: CLIP2.024464_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024464
Chromosome:chromosome 12
Location:5627016
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g531400 NPHP4,NPH4,POC10 (1 of 1) K16478 - nephrocystin-4 (NPHP4); Proteome of centriole protein 10 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGCGATACCCTTTGAACTACGATGTGGTGCAAGAACGGTAAACAGC
Internal bar code:GGTTGGCGGAAGTATCTTTTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4737
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:76
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:76

Suggested primers for confirmation by PCR

Suggested primer 1:CTCGTGTCCTTTGGCCTAGG
Suggested primer 2:AGGTGTTGCCGTAGAAGGTG