Insertion junction: CLIP2.042429_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.042429
Chromosome:chromosome 2
Location:4773593
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g108700 (1 of 4) 2.7.10.2//2.7.11.1//2.7.12.1 - Non-specific protein-tyrosine kinase / Cytoplasmic protein tyrosine kinase // Non-specific serine/threonine protein kinase / Threonine-specific protein kinase // Dual-specificity kinase 5'UTR_intron
Cre02.g108750 (1 of 6) PTHR23257//PTHR23257:SF529 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCCCTGAAACTATCCCCCAGCACCGCGCGCTGCCAGCCTTCCCGCCAC
Internal bar code:TGATGCATTCAGGGGGGTTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:550
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGAGGAGAGCCAGAAGGG
Suggested primer 2:GTTGGTGCCTTTGACAGCTG