Insertion junction: CLIP2.079002_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.079002
Chromosome:chromosome 10
Location:2742239
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g438000 3'UTR
Cre10.g438050 KAS3,mtKAS (1 of 1) PTHR11712//PTHR11712:SF273 - POLYKETIDE SYNTHASE-RELATED // 3-OXOACYL-[ACYL-CARRIER-PROTEIN] SYNTHASE, MITOCHONDRIAL; Putative mitochondrial beta-ketoacyl-ACP synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTACACCCGTCAAGTTCCCGAGCGCATAAGAACCCTCGGGGCAAGATCG
Internal bar code:GGGTGAAGGACAACTTACGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:2589
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TTGAAACGTCCGCCTCATCA
Suggested primer 2:ATTCAGATGTGCTGCTGGCT