Gene: Cre03.g191250

Overview

Common name:LCI34
Defline:Low-CO2-inducible protein 34
Description:Low-CO2 inducible gene revealed by cDNA array analyses; probably organelle-targetted; regulated by CCM1 [PMID: 15235119]
Synonyms:Cre03.g191250.t1.1,g3958.t1
Chromosome:chromosome 3

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC1F10

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

chloroplast/not homogeneous/not pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre03.g191250 LCI34 Cre03.g188250 AGP4,STA6 Mackinder et al. 2017
Cre03.g191250 LCI34 Cre03.g191250 LCI34 Mackinder et al. 2017
Cre03.g191250 LCI34 Cre05.g243050 TRX3,TRXf2,TRXF2 Mackinder et al. 2017
Cre03.g191250 LCI34 Cre10.g444700 SBE3,SBE2b Mackinder et al. 2017
Cre03.g191250 LCI34 Cre13.g567950 STA1,AGP1 Mackinder et al. 2017

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000939_2 CLIP2.000939 5'UTR 80 6.1
LMJ.RY0402.051844_1 LMJ.RY0402.051844 3'UTR 58 5.5
LMJ.RY0402.051844_2 LMJ.RY0402.051844 3'UTR 73 5.5
LMJ.RY0402.093768_1 LMJ.RY0402.093768 5'UTR 73 5.5
LMJ.RY0402.098295_1 LMJ.RY0402.098295 3'UTR 95 5.5
LMJ.RY0402.098295_2 LMJ.RY0402.098295 3'UTR 95 5.5
LMJ.RY0402.106659_1 LMJ.RY0402.106659 CDS 58 5.5
LMJ.RY0402.115443_1 LMJ.RY0402.115443 3'UTR 58 5.5
LMJ.RY0402.126381_1 LMJ.RY0402.126381 3'UTR 58 5.5
LMJ.RY0402.135978_1 LMJ.RY0402.135978 3'UTR 73 5.5
LMJ.RY0402.150572_1 LMJ.RY0402.150572 3'UTR 73 5.5
LMJ.RY0402.152091_1 LMJ.RY0402.152091 CDS 73 5.5
LMJ.RY0402.181552_1 LMJ.RY0402.181552 3'UTR 95 5.5
LMJ.RY0402.181552_2 LMJ.RY0402.181552 3'UTR 95 5.5
LMJ.RY0402.181747_1 LMJ.RY0402.181747 5'UTR 73 5.5
LMJ.RY0402.181747_2 LMJ.RY0402.181747 5'UTR 58 5.5
LMJ.RY0402.181747_3 LMJ.RY0402.181747 5'UTR 58 5.5
LMJ.RY0402.191311_1 LMJ.RY0402.191311 CDS 73 5.5
LMJ.RY0402.205289_1 LMJ.RY0402.205289 5'UTR 73 5.5
LMJ.RY0402.205585_2 LMJ.RY0402.205585 3'UTR 73 5.5
LMJ.RY0402.208612_2 LMJ.RY0402.208612 3'UTR 95 5.5
LMJ.RY0402.217607_1 LMJ.RY0402.217607 3'UTR 73 5.5
LMJ.RY0402.219478_1 LMJ.RY0402.219478 5'UTR 73 5.5
LMJ.RY0402.257268_1 LMJ.RY0402.257268 3'UTR 58 5.5

Gene Annotations

PFAM:
PANTHER:
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.