| Common name: | VDR1 |
| Defline: | violaxanthin de-epoxidase related, chloroplast; (1 of 1) 1.10.99.3 - Transferred entry: 1.23.5.1 |
| Description: | null-allele mutant was isolated (PMID 29743196) |
| Synonyms: | g9603.t1,Cre02.g122650.t1.1,VDR1,Cre02.g122650.t1.2 |
| Chromosome: | chromosome 2 (genome version v6.1), chromosome 9 (genome version v5.5) |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002016_1 | CLIP2.002016 | CDS | 80 | 6.1 |
| CLIP2.002016_2 | CLIP2.002016 | CDS | 80 | 6.1 |
| CLIP2.003149_1 | CLIP2.003149 | intron | 80 | 6.1 |
| CLIP2.003149_2 | CLIP2.003149 | intron | 80 | 6.1 |
| CLIP2.004740_1 | CLIP2.004740 | intron | 80 | 6.1 |
| CLIP2.004740_2 | CLIP2.004740 | intron | 80 | 6.1 |
| CLIP2.005828_1 | CLIP2.005828 | CDS | 80 | 6.1 |
| CLIP2.005828_2 | CLIP2.005828 | CDS | 80 | 6.1 |
| CLIP2.007413_1 | CLIP2.007413 | intron | 80 | 6.1 |
| CLIP2.007413_2 | CLIP2.007413 | intron | 80 | 6.1 |
| LMJ.RY0402.229927_4 | LMJ.RY0402.229927 | intron | 95 | 5.5 |
| LMJ.RY0402.229927_5 | LMJ.RY0402.229927 | intron | 95 | 5.5 |
| LMJ.RY0402.248680_2 | LMJ.RY0402.248680 | CDS/intron | 73 | 5.5 |
| LMJ.RY0402.254043_1 | LMJ.RY0402.254043 | intron | 73 | 5.5 |
| PFAM: | |
| PANTHER: | PTHR33970 PTHR33970:SF2 |
| KEGG_ec: | EC:1.10.99.3 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | |
| Best arabidopsis TAIR name: | AT2G21860 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | violaxanthin de-epoxidase-related |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.