Gene: Cre10.g425900
Overview
| Common name: | LHCA5 |
| Defline: | (1 of 2) K08910 - light-harvesting complex I chlorophyll a/b binding protein 4 (LHCA4); Light-harvesting protein 5 of photosystem I |
| Description: | |
| Synonyms: | Cre10.g425900.t1.1,g10525.t1 |
| Chromosome: | chromosome 10 |
Protein Localization
A plasmid for expressing Cre10.g425900 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre10.g425900-Venus-3xFLAG
Imaged strain: CSI_LW02F1
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/not pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
| Bait ID | Bait Name | Prey ID | Prey Name | Reference |
|---|---|---|---|---|
| Cre11.g476750 | FNR1 | Cre10.g425900 | LHCA5 | Wang et al. 2023 |
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001292_1 | CLIP2.001292 | gene_edge/mRNA_edge/3'UTR | 80 | 6.1 |
| CLIP2.002204_1 | CLIP2.002204 | CDS | 80 | 6.1 |
| CLIP2.002204_2 | CLIP2.002204 | CDS | 80 | 6.1 |
| LMJ.RY0402.044057_1 | LMJ.RY0402.044057 | intron | 73 | 5.5 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR21649 PTHR21649:SF13 |
| KEGG_ec: | |
| KEGG_orthology: | K08910 |
| KOG: | |
| Gene ontology terms:: | GO:0009765, GO:0016020 |
| Best arabidopsis TAIR name: | AT3G47470.1 |
| Best arabidopsis TAIR symbol: | CAB4,LHCA4 |
| Best arabidopsis TAIR defline: | light-harvesting chlorophyll-protein complex I subunit A4 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.