Gene: Cre12.g515350

Overview

Common name:
Defline:
Description:
Synonyms:g12714.t1, g12714.t3, g12714.t2
Chromosome:chromosome 12

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
LMJ.RY0402.039405_1 LMJ.RY0402.039405 intron|outside_mRNA 95 5.5
LMJ.RY0402.039405_2 LMJ.RY0402.039405 intron|outside_mRNA 95 5.5
LMJ.RY0402.047123_1 LMJ.RY0402.047123 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.047123_2 LMJ.RY0402.047123 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.053552_1 LMJ.RY0402.053552 CDS|outside_mRNA 73 5.5
LMJ.RY0402.054434_1 LMJ.RY0402.054434 3'UTR_intron|intron 73 5.5
LMJ.RY0402.097179_2 LMJ.RY0402.097179 intron|outside_mRNA 73 5.5
LMJ.RY0402.101976_1 LMJ.RY0402.101976 CDS|outside_mRNA 58 5.5
LMJ.RY0402.105093_1 LMJ.RY0402.105093 intron|outside_mRNA 73 5.5
LMJ.RY0402.111444_1 LMJ.RY0402.111444 5'UTR 95 5.5
LMJ.RY0402.111444_2 LMJ.RY0402.111444 5'UTR 95 5.5
LMJ.RY0402.126029_1 LMJ.RY0402.126029 3'UTR|CDS 95 5.5
LMJ.RY0402.126029_2 LMJ.RY0402.126029 3'UTR|CDS 95 5.5
LMJ.RY0402.131802_2 LMJ.RY0402.131802 CDS|outside_mRNA 58 5.5
LMJ.RY0402.157126_1 LMJ.RY0402.157126 intron|outside_mRNA 95 5.5
LMJ.RY0402.157126_2 LMJ.RY0402.157126 intron|outside_mRNA 95 5.5
LMJ.RY0402.189645_1 LMJ.RY0402.189645 3'UTR|outside_mRNA 73 5.5
LMJ.RY0402.206269_1 LMJ.RY0402.206269 CDS 73 5.5
LMJ.RY0402.206269_2 LMJ.RY0402.206269 intron 58 5.5
LMJ.RY0402.237937_2 LMJ.RY0402.237937 3'UTR_intron|intron 73 5.5
LMJ.RY0402.240405_1 LMJ.RY0402.240405 intron|outside_mRNA 73 5.5
LMJ.RY0402.249690_1 LMJ.RY0402.249690 intron|outside_mRNA 73 5.5
LMJ.RY0402.253665_1 LMJ.RY0402.253665 3'UTR|outside_mRNA 95 5.5
LMJ.RY0402.253665_2 LMJ.RY0402.253665 3'UTR|outside_mRNA 95 5.5

Gene Annotations

PFAM:PF00415, PF00754, PF08016, PF09458, , PF00024, PF00754, PF09458
PANTHER: PTHR22870:SF117 PTHR22870
KEGG_ec:
KEGG_orthology:
KOG:KOG0487
Gene ontology terms::GO:0007155, GO:0005529
Best arabidopsis TAIR name:AT5G63860.1
Best arabidopsis TAIR symbol:UVR8
Best arabidopsis TAIR defline:Regulator of chromosome condensation (RCC1) family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 3 of 6 ( 90% confidence (FDR = 0.1))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.