Gene: Cre12.g544114 (Genome version: v5.5)

Overview

Common name:CYN20-6
Defline:
Description:
Synonyms:g13686.t1
Chromosome:chromosome_12

Protein Localization

A plasmid for expressing Cre12.g544114 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g544114-Venus-3xFLAG

Imaged strain: CSI_LW01G10

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.

Classification(s):

chloroplast/pyrenoid/pyrenoid traversing enriched

chloroplast/not homogeneous/enriched in thylakoid

If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.

VenusChlorophyllBright fieldMerged

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Orientation Insertion Junction Feature Confidence (%)
LMJ.RY0402.045418_1 LMJ.RY0402.045418 antisense CDS 58
LMJ.RY0402.059539_1 LMJ.RY0402.059539 antisense intron 95
LMJ.RY0402.059539_2 LMJ.RY0402.059539 antisense intron 95
LMJ.RY0402.069308_1 LMJ.RY0402.069308 antisense CDS 58
LMJ.RY0402.091072_1 LMJ.RY0402.091072 antisense CDS 58
LMJ.RY0402.114529_1 LMJ.RY0402.114529 sense CDS 58
LMJ.RY0402.115171_1 LMJ.RY0402.115171 sense intron 73
LMJ.RY0402.117509_1 LMJ.RY0402.117509 sense CDS 58
LMJ.RY0402.126315_1 LMJ.RY0402.126315 sense CDS 58
LMJ.RY0402.126562_1 LMJ.RY0402.126562 sense CDS 58
LMJ.RY0402.133742_2 LMJ.RY0402.133742 sense CDS 58
LMJ.RY0402.148600_1 LMJ.RY0402.148600 sense CDS 58
LMJ.RY0402.150279_1 LMJ.RY0402.150279 antisense CDS 58
LMJ.RY0402.162060_1 LMJ.RY0402.162060 sense CDS 58
LMJ.RY0402.178816_1 LMJ.RY0402.178816 antisense CDS 58
LMJ.RY0402.178816_2 LMJ.RY0402.178816 antisense CDS 58
LMJ.RY0402.187504_1 LMJ.RY0402.187504 sense CDS 58
LMJ.RY0402.210228_2 LMJ.RY0402.210228 antisense CDS 58
LMJ.RY0402.221989_3 LMJ.RY0402.221989 sense intron 58
LMJ.RY0402.221989_4 LMJ.RY0402.221989 sense intron 58
LMJ.RY0402.230873_1 LMJ.RY0402.230873 antisense CDS 58
LMJ.RY0402.233421_2 LMJ.RY0402.233421 antisense CDS 58
LMJ.RY0402.251298_2 LMJ.RY0402.251298 antisense intron 73
LMJ.RY0402.251988_1 LMJ.RY0402.251988 sense intron 58

Gene Annotations

PFAM:PF00160
PANTHER: PTHR11071 PTHR11071:SF140
KEGG_ec:5.2.1.8
KEGG_orthology:K03768
KOG:KOG0880
Gene ontology terms::GO:0003755, GO:0006457
Best arabidopsis TAIR name:AT5G13120.1
Best arabidopsis TAIR symbol:ATCYP20-2,CYP20-2
Best arabidopsis TAIR defline:cyclophilin 20-2
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.