| Common name: | HKR5,HIK5,HIK |
| Defline: | (1 of 1) IPR000014//IPR001789//IPR003594//IPR003661//IPR004358//IPR005467//IPR011006 - PAS domain // Signal transduction response regulator, receiver domain // Histidine kinase-like ATPase, C-terminal domain // Signal transduction histidine kinase, dimerisation/phosphoacceptor domain // Signal transduction histidine kinase-related protein, C-terminal // Histidine kinase domain // CheY-like superfamily; Histidine kinase response regulator of two-component system |
| Description: | Contains PAS, Histidine kinase and signal receiver domains; Originally named HKR5, but was changed to avoid confusion with the histidine-kinase rhodopsins; |
| Synonyms: | HIK,g14047.t1, HKR5 |
| Chromosome: | chromosome 13 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.035097_1 | CLIP2.035097 | CDS | 80 | 6.1 |
| CLIP2.035097_2 | CLIP2.035097 | CDS | 80 | 6.1 |
| CLIP2.037041_1 | CLIP2.037041 | CDS | 80 | 6.1 |
| CLIP2.052838_1 | CLIP2.052838 | CDS | 80 | 6.1 |
| CLIP2.052838_2 | CLIP2.052838 | CDS | 80 | 6.1 |
| CLIP2.057996_1 | CLIP2.057996 | 5'UTR | 80 | 6.1 |
| CLIP2.057996_2 | CLIP2.057996 | 5'UTR | 80 | 6.1 |
| CLIP2.058653_1 | CLIP2.058653 | CDS | 63 | 6.1 |
| CLIP2.065970_1 | CLIP2.065970 | 3'UTR | 80 | 6.1 |
| CLIP2.068344_1 | CLIP2.068344 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.081414_2 | LMJ.RY0402.081414 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.108038_1 | LMJ.RY0402.108038 | intron | 95 | 5.5 |
| LMJ.RY0402.108038_2 | LMJ.RY0402.108038 | intron | 95 | 5.5 |
| LMJ.RY0402.119149_3 | LMJ.RY0402.119149 | intron | 95 | 5.5 |
| LMJ.RY0402.119149_4 | LMJ.RY0402.119149 | intron | 95 | 5.5 |
| LMJ.RY0402.144408_2 | LMJ.RY0402.144408 | intron | 58 | 5.5 |
| LMJ.RY0402.245506_1 | LMJ.RY0402.245506 | CDS | 58 | 5.5 |
| PFAM: | PF00072, PF00512, PF02518, PF13426 |
| PANTHER: | PTHR24423 |
| KEGG_ec: | EC:2.7.13.3 |
| KEGG_orthology: | K14509 |
| KOG: | |
| Gene ontology terms:: | GO:0000155, GO:0000160, GO:0007165, GO:0016310, GO:0016772 |
| Best arabidopsis TAIR name: | AT1G27320.1 |
| Best arabidopsis TAIR symbol: | AHK3,HK3 |
| Best arabidopsis TAIR defline: | histidine kinase 3 |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| LAT042B08, screen 1 of 1 ( 79% confidence (FDR = 0.21)) |
| LAT042C03, screen 1 of 1 ( 99% confidence (FDR = 0.0099)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.