| Common name: | HKR5,HKR6,HKR56,COP9,COP10 |
| Defline: | (1 of 1) IPR000104//IPR001054//IPR001789//IPR003594//IPR003661//IPR004358//IPR005467//IPR011006//IPR029730//IPR029787 - Antifreeze protein, type I // Adenylyl cyclase class-3/4/guanylyl cyclase // Signal transduction response regulator, receiver domain // Histidine kinase-like ATPase, C-terminal domain // Signal transduction histidine kinase, dimerisation/phosphoacceptor domain // Signal transduction histidine kinase-related protein, C-terminal // Histidine kinase domain // CheY-like superfamily // Archaeal/bacterial/fungal rhodopsin-like // Nucleotide cyclase; Histidine kinase rhodopsin 5/6 |
| Description: | Encodes two proteins Histidine kinase rhodopsin 5/6 (HKR5 and HKR6) also known as Chlamoypsin 9/10 (COP9 and COP10) ; contains bacteriorhodopsin, Histine kinase, response regulator receiver and Guanylate/adenylate cyclase catalytic domains; next to an expressed transposon-derived gene |
| Synonyms: | COP9,g15518.t2,COP10,HKR6,HKR5 |
| Chromosome: | chromosome 15 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.038324_2 | CLIP2.038324 | intron | 80 | 6.1 |
| CLIP2.038324_3 | CLIP2.038324 | intron | 80 | 6.1 |
| CLIP2.045970_1 | CLIP2.045970 | intron | 80 | 6.1 |
| CLIP2.045970_2 | CLIP2.045970 | intron | 80 | 6.1 |
| CLIP2.057654_3 | CLIP2.057654 | intron | 63 | 6.1 |
| CLIP2.066672_1 | CLIP2.066672 | intron | 63 | 6.1 |
| CLIP2.071974_1 | CLIP2.071974 | intron | 63 | 6.1 |
| CLIP2.072441_1 | CLIP2.072441 | intron | 63 | 6.1 |
| CLIP2.072946_1 | CLIP2.072946 | intron | 63 | 6.1 |
| CLIP2.076821_1 | CLIP2.076821 | intron | 63 | 6.1 |
| CLIP2.076890_1 | CLIP2.076890 | intron | 40 | 6.1 |
| LMJ.RY0402.072124_2 | LMJ.RY0402.072124 | intron | 73 | 5.5 |
| LMJ.RY0402.072484_1 | LMJ.RY0402.072484 | intron | 73 | 5.5 |
| LMJ.RY0402.096168_1 | LMJ.RY0402.096168 | intron | 73 | 5.5 |
| LMJ.RY0402.097605_1 | LMJ.RY0402.097605 | intron | 58 | 5.5 |
| LMJ.RY0402.116407_2 | LMJ.RY0402.116407 | intron | 95 | 5.5 |
| LMJ.RY0402.116407_3 | LMJ.RY0402.116407 | intron | 95 | 5.5 |
| LMJ.RY0402.242254_1 | LMJ.RY0402.242254 | intron | 73 | 5.5 |
| PFAM: | PF00072, PF00211, PF00512, PF01036, PF02518 |
| PANTHER: | PTHR24423 PTHR24423:SF442 |
| KEGG_ec: | EC:2.7.13.3 |
| KEGG_orthology: | |
| KOG: | |
| Gene ontology terms:: | GO:0000155, GO:0000160, GO:0007165, GO:0009190, GO:0016020, GO:0016310, GO:0016772, GO:0016849, GO:0035556, GO:0042309, GO:0050825, GO:0050826 |
| Best arabidopsis TAIR name: | AT2G17820.1 |
| Best arabidopsis TAIR symbol: | AHK1,ATHK1,HK1 |
| Best arabidopsis TAIR defline: | histidine kinase 1 |
| Phytozome Locus Page |
Our phenotype screens did not find statistically significant results for this gene.