| Common name: | POLQ1 |
| Defline: | DNA polymerase theta; (1 of 2) K02349 - DNA polymerase theta [EC:2.7.7.7] (POLQ) |
| Description: | Homologous to eukaryotic DNA polymerase theta. Involved in DNA repair; a class A polymerase. |
| Synonyms: | g16038.t1,Cre16.g664300.t1.3,POLQ1 |
| Chromosome: | chromosome 16 |
We did not create a plasmid for this gene.
We did not determine any protein-protein interactions for this gene.
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.020468_2 | CLIP2.020468 | CDS | 80 | 6.1 |
| CLIP2.020468_3 | CLIP2.020468 | CDS | 80 | 6.1 |
| CLIP2.025360_2 | CLIP2.025360 | CDS | 80 | 6.1 |
| CLIP2.025360_3 | CLIP2.025360 | CDS | 80 | 6.1 |
| CLIP2.033667_1 | CLIP2.033667 | CDS | 80 | 6.1 |
| CLIP2.033667_2 | CLIP2.033667 | CDS | 80 | 6.1 |
| CLIP2.039478_1 | CLIP2.039478 | CDS | 80 | 6.1 |
| CLIP2.039478_2 | CLIP2.039478 | CDS | 80 | 6.1 |
| CLIP2.044046_1 | CLIP2.044046 | CDS | 80 | 6.1 |
| CLIP2.044046_2 | CLIP2.044046 | CDS | 80 | 6.1 |
| LMJ.RY0402.062989_1 | LMJ.RY0402.062989 | intron | 95 | 5.5 |
| LMJ.RY0402.062989_2 | LMJ.RY0402.062989 | intron | 95 | 5.5 |
| LMJ.RY0402.073421_2 | LMJ.RY0402.073421 | CDS | 58 | 5.5 |
| LMJ.RY0402.074509_2 | LMJ.RY0402.074509 | CDS | 58 | 5.5 |
| LMJ.RY0402.076008_1 | LMJ.RY0402.076008 | intron | 95 | 5.5 |
| LMJ.RY0402.076008_2 | LMJ.RY0402.076008 | intron | 95 | 5.5 |
| LMJ.RY0402.117867_1 | LMJ.RY0402.117867 | intron | 73 | 5.5 |
| LMJ.RY0402.180002_5 | LMJ.RY0402.180002 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.189429_1 | LMJ.RY0402.189429 | CDS | 58 | 5.5 |
| LMJ.RY0402.189429_2 | LMJ.RY0402.189429 | intron | 73 | 5.5 |
| PFAM: | PF00270, PF00271, PF00476 |
| PANTHER: | PTHR10133 |
| KEGG_ec: | EC:2.7.7.7 |
| KEGG_orthology: | K02349 |
| KOG: | KOG0950 |
| Gene ontology terms:: | GO:0003676, GO:0003677, GO:0003887, GO:0005524, GO:0006260, GO:0006261 |
| Best arabidopsis TAIR name: | AT4G32700 |
| Best arabidopsis TAIR symbol: | TEB |
| Best arabidopsis TAIR defline: | helicases;ATP-dependent helicases;nucleic acid binding;ATP binding;DNA-directed DNA polymerases;DNA binding |
| Phytozome Locus Page |
Mutants in this gene exhibit a phenotype under the following conditions:
| Bleomycin sulfate, screen 2 of 2 ( 82% confidence (FDR = 0.18)) |
| Zeocin, screen 1 of 5 ( 93% confidence (FDR = 0.066)) |
| Zeocin, screen 3 of 5 ( 86% confidence (FDR = 0.14)) |
| Zeocin, screen 5 of 5 ( 99% confidence (FDR = 0.0018)) |
Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.
If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.