Gene: Cre16.g675500
Overview
| Common name: | FKB16-5,FKB8,FKB16E |
| Defline: | Peptidyl-prolyl cis-trans isomerase, FKBP-type; (1 of 25) PTHR10516 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE |
| Description: | FKBP-type peptidyl-prolyl cis-trans isomerase (EC 5.2.1.8) (PPiase) (Rotamase) (Immunophilin); homologous to Cyanobacterial FKBPs and At5g45680 (FKBP13, thylakoid lumen); but could be mitochondrial as it lacks a RR TAT targeting motif [PMID: 15701785]; linked to FKB16-2 |
| Synonyms: | FKB16-5,g16608.t1,FKB8,Cre16.g675500.t1.1 |
| Chromosome: | chromosome 16 |
Protein Localization
A plasmid for expressing Cre16.g675500 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre16.g675500-Venus-3xFLAG
Imaged strain: CSI_LW04D8
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/homogeneous/pyrenoid depleted
shapes in cytoplasm/uncategorized shapes in cytoplasm
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.002027_1 | CLIP2.002027 | CDS | 80 | 6.1 |
| CLIP2.002027_2 | CLIP2.002027 | CDS | 80 | 6.1 |
| LMJ.RY0402.192273_1 | LMJ.RY0402.192273 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.192273_2 | LMJ.RY0402.192273 | 5'UTR | 95 | 5.5 |
| LMJ.RY0402.243894_4 | LMJ.RY0402.243894 | 3'UTR | 95 | 5.5 |
| LMJ.RY0402.243894_5 | LMJ.RY0402.243894 | 3'UTR | 95 | 5.5 |
Gene Annotations
| PFAM: | PF00254 |
| PANTHER: | PTHR10516 |
| KEGG_ec: | EC:5.2.1.8 |
| KEGG_orthology: | |
| KOG: | KOG0544 |
| Gene ontology terms:: | GO:0006457 |
| Best arabidopsis TAIR name: | AT5G45680 |
| Best arabidopsis TAIR symbol: | ATFKBP13,FKBP13 |
| Best arabidopsis TAIR defline: | FK506-binding protein 13 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.