Gene: Cre16.g683371

Overview

Common name:ODC2
Defline:(1 of 2) 4.1.1.17 - Ornithine decarboxylase / L-ornithine carboxy-lyase; Ornithine decarboxylase 2
Description:Pyridoxal-dependent decarboxylase acting on ornithine to produce putrescine, first step in polyamine biosynthesis(PMID: 11950995); fully active, based on conservation of important residues (PMID: 16847581), in particular a conserved lysine residue which is known, in mouse ODC, to be the site of attachment of the pyridoxal-phosphate group, a stretch of three consecutive glycine residues that has been proposed to be part of a substrate-binding region
Synonyms:Cre01.g069400.t1.1,g16803.t1,Cre01.g069400.t1.2,ODC2
Chromosome:chromosome 16

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.002596_1 CLIP2.002596 3'UTR 80 6.1
CLIP2.002596_2 CLIP2.002596 3'UTR 80 6.1
CLIP2.015348_1 CLIP2.015348 intron 80 6.1
CLIP2.015348_2 CLIP2.015348 intron 80 6.1
CLIP2.020208_1 CLIP2.020208 intron 80 6.1
CLIP2.020208_2 CLIP2.020208 intron 80 6.1
CLIP2.021364_3 CLIP2.021364 5'UTR 80 6.1
CLIP2.021364_4 CLIP2.021364 5'UTR 80 6.1
CLIP2.035539_1 CLIP2.035539 CDS 80 6.1
CLIP2.035539_2 CLIP2.035539 CDS 80 6.1
CLIP2.035902_4 CLIP2.035902 5'UTR 80 6.1
CLIP2.037075_3 CLIP2.037075 intron 80 6.1
CLIP2.037075_4 CLIP2.037075 intron 80 6.1
CLIP2.051149_1 CLIP2.051149 CDS 80 6.1
CLIP2.051149_2 CLIP2.051149 CDS 80 6.1
CLIP2.074761_3 CLIP2.074761 intron 40 6.1
LMJ.RY0402.041472_1 LMJ.RY0402.041472 CDS 73 5.5
LMJ.RY0402.059931_1 LMJ.RY0402.059931 intron 58 5.5
LMJ.RY0402.068702_2 LMJ.RY0402.068702 CDS/intron 73 5.5
LMJ.RY0402.099183_1 LMJ.RY0402.099183 5'UTR_intron 73 5.5
LMJ.RY0402.138042_1 LMJ.RY0402.138042 5'UTR_intron 95 5.5
LMJ.RY0402.138042_2 LMJ.RY0402.138042 5'UTR_intron 95 5.5
LMJ.RY0402.170861_2 LMJ.RY0402.170861 3'UTR 73 5.5
LMJ.RY0402.174205_2 LMJ.RY0402.174205 intron 58 5.5
LMJ.RY0402.181870_1 LMJ.RY0402.181870 3'UTR 95 5.5
LMJ.RY0402.181870_2 LMJ.RY0402.181870 3'UTR 95 5.5
LMJ.RY0402.194362_1 LMJ.RY0402.194362 intron 95 5.5
LMJ.RY0402.194362_2 LMJ.RY0402.194362 intron 95 5.5
LMJ.RY0402.205127_1 LMJ.RY0402.205127 intron 95 5.5
LMJ.RY0402.205127_2 LMJ.RY0402.205127 intron 95 5.5
LMJ.RY0402.229511_1 LMJ.RY0402.229511 intron 73 5.5
LMJ.RY0402.233481_1 LMJ.RY0402.233481 intron 73 5.5
LMJ.RY0402.233643_1 LMJ.RY0402.233643 5'UTR 73 5.5

Gene Annotations

PFAM:PF00278, PF02784
PANTHER: PTHR11482 PTHR11482:SF6
KEGG_ec:EC:4.1.1.17
KEGG_orthology:K01581
KOG:KOG0622
Gene ontology terms::GO:0003824, GO:0006596
Best arabidopsis TAIR name:AT3G14390.1
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:Pyridoxal-dependent decarboxylase family protein
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.