Gene: Cre04.g216850

Overview

Common name:TUA2
Defline:(1 of 2) K07374 - tubulin alpha (TUBA); Alpha tubulin 2
Description:GI:27358004; PMID: 3855249, PMID: 3460413, PMID: 14676280
Synonyms:g4512.t1,Cre04.g216850.t1.1
Chromosome:chromosome 4

Protein Localization

A plasmid for expressing Cre04.g216850 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre04.g216850-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.006927_1 CLIP2.006927 5'UTR 80 6.1
CLIP2.023610_1 CLIP2.023610 CDS 80 6.1
CLIP2.023610_2 CLIP2.023610 CDS 80 6.1
CLIP2.025369_1 CLIP2.025369 intron 80 6.1
CLIP2.025369_2 CLIP2.025369 intron 80 6.1
CLIP2.042274_1 CLIP2.042274 CDS 80 6.1
CLIP2.045758_1 CLIP2.045758 CDS 80 6.1
CLIP2.045758_2 CLIP2.045758 CDS 80 6.1
CLIP2.047976_3 CLIP2.047976 CDS 80 6.1
CLIP2.047976_4 CLIP2.047976 CDS 80 6.1
CLIP2.052181_1 CLIP2.052181 CDS 80 6.1
CLIP2.052181_2 CLIP2.052181 CDS 80 6.1
LMJ.RY0402.077702_1 LMJ.RY0402.077702 CDS 73 5.5
LMJ.RY0402.082056_1 LMJ.RY0402.082056 CDS 95 5.5
LMJ.RY0402.082056_2 LMJ.RY0402.082056 CDS 95 5.5
LMJ.RY0402.089475_2 LMJ.RY0402.089475 5'UTR 73 5.5
LMJ.RY0402.113783_1 LMJ.RY0402.113783 5'UTR 73 5.5
LMJ.RY0402.128476_1 LMJ.RY0402.128476 3'UTR_intron 95 5.5
LMJ.RY0402.128476_2 LMJ.RY0402.128476 3'UTR_intron 95 5.5
LMJ.RY0402.137081_1 LMJ.RY0402.137081 intron 95 5.5
LMJ.RY0402.137081_2 LMJ.RY0402.137081 intron 95 5.5
LMJ.RY0402.137081_3 LMJ.RY0402.137081 intron 58 5.5
LMJ.RY0402.137081_4 LMJ.RY0402.137081 intron 73 5.5
LMJ.RY0402.160032_1 LMJ.RY0402.160032 CDS 95 5.5
LMJ.RY0402.160032_2 LMJ.RY0402.160032 CDS 95 5.5
LMJ.RY0402.162073_1 LMJ.RY0402.162073 5'UTR 95 5.5
LMJ.RY0402.162073_2 LMJ.RY0402.162073 5'UTR 95 5.5
LMJ.RY0402.162929_1 LMJ.RY0402.162929 3'UTR 73 5.5
LMJ.RY0402.167855_1 LMJ.RY0402.167855 CDS 73 5.5
LMJ.RY0402.176521_1 LMJ.RY0402.176521 5'UTR 58 5.5
LMJ.RY0402.178049_1 LMJ.RY0402.178049 3'UTR 73 5.5
LMJ.RY0402.179208_1 LMJ.RY0402.179208 5'UTR 58 5.5
LMJ.RY0402.185674_1 LMJ.RY0402.185674 CDS 73 5.5
LMJ.RY0402.188089_2 LMJ.RY0402.188089 CDS 58 5.5
LMJ.RY0402.191359_1 LMJ.RY0402.191359 intron 95 5.5
LMJ.RY0402.191359_2 LMJ.RY0402.191359 CDS 95 5.5
LMJ.RY0402.199762_3 LMJ.RY0402.199762 intron 95 5.5
LMJ.RY0402.199762_4 LMJ.RY0402.199762 intron 95 5.5
LMJ.RY0402.207849_1 LMJ.RY0402.207849 3'UTR_intron 95 5.5
LMJ.RY0402.207849_2 LMJ.RY0402.207849 3'UTR_intron 95 5.5
LMJ.RY0402.208107_1 LMJ.RY0402.208107 5'UTR 95 5.5
LMJ.RY0402.208107_2 LMJ.RY0402.208107 5'UTR 95 5.5
LMJ.RY0402.214267_1 LMJ.RY0402.214267 3'UTR 73 5.5
LMJ.RY0402.219500_1 LMJ.RY0402.219500 intron 95 5.5
LMJ.RY0402.219500_2 LMJ.RY0402.219500 intron 95 5.5
LMJ.RY0402.233989_3 LMJ.RY0402.233989 intron 95 5.5
LMJ.RY0402.233989_4 LMJ.RY0402.233989 intron 95 5.5

Gene Annotations

PFAM:PF00091, PF03953
PANTHER: PTHR11588 PTHR11588:SF101
KEGG_ec:
KEGG_orthology:K07374
KOG:KOG1376
Gene ontology terms::GO:0003924, GO:0005200, GO:0005525, GO:0005874, GO:0007017, GO:0043234, GO:0051258
Best arabidopsis TAIR name:AT1G50010
Best arabidopsis TAIR symbol:TUA2
Best arabidopsis TAIR defline:tubulin alpha-2 chain
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 1 of 6 ( 82% confidence (FDR = 0.18))
Paromomycin, screen 3 of 6 ( 91% confidence (FDR = 0.086))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.