Gene: Cre05.g232550

Overview

Common name:GPM4,PGM4,CA1P1
Defline:(1 of 1) 3.1.3.63 - 2-carboxy-D-arabinitol-1-phosphatase; 2-Carboxy-D-arabinitol-1-phosphatase
Description:Phosphoglycerate mutase-like protein lacking PGM activity, but having 2-carboxy-D-arabinitol 1-phosphate (CA1P) phosphatase activity;
Synonyms:PGM4,GPM4,Cre05.g232550.t1.1,g5123.t1
Chromosome:chromosome 5

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.000478_1 CLIP2.000478 CDS 80 6.1
CLIP2.000478_2 CLIP2.000478 CDS 80 6.1
CLIP2.000501_1 CLIP2.000501 intron 80 6.1
CLIP2.000501_2 CLIP2.000501 intron 80 6.1
CLIP2.000622_1 CLIP2.000622 CDS 80 6.1
CLIP2.000854_1 CLIP2.000854 intron 80 6.1
CLIP2.001005_1 CLIP2.001005 CDS 80 6.1
CLIP2.001005_2 CLIP2.001005 CDS 80 6.1
CLIP2.001055_1 CLIP2.001055 intron 80 6.1
CLIP2.001055_2 CLIP2.001055 intron 80 6.1
LMJ.RY0402.042606_1 LMJ.RY0402.042606 intron 95 5.5
LMJ.RY0402.042606_2 LMJ.RY0402.042606 intron 95 5.5
LMJ.RY0402.054854_1 LMJ.RY0402.054854 CDS 95 5.5
LMJ.RY0402.054854_2 LMJ.RY0402.054854 CDS 95 5.5
LMJ.RY0402.068449_1 LMJ.RY0402.068449 CDS 73 5.5
LMJ.RY0402.080940_1 LMJ.RY0402.080940 CDS 73 5.5
LMJ.RY0402.099006_1 LMJ.RY0402.099006 CDS 95 5.5
LMJ.RY0402.099006_2 LMJ.RY0402.099006 CDS 95 5.5
LMJ.RY0402.099391_1 LMJ.RY0402.099391 CDS 95 5.5
LMJ.RY0402.099391_2 LMJ.RY0402.099391 CDS 95 5.5
LMJ.RY0402.106095_1 LMJ.RY0402.106095 CDS 95 5.5
LMJ.RY0402.106095_2 LMJ.RY0402.106095 CDS 95 5.5
LMJ.RY0402.114390_1 LMJ.RY0402.114390 CDS 95 5.5
LMJ.RY0402.114390_2 LMJ.RY0402.114390 CDS 95 5.5
LMJ.RY0402.117340_1 LMJ.RY0402.117340 CDS 95 5.5
LMJ.RY0402.117340_2 LMJ.RY0402.117340 CDS 95 5.5
LMJ.RY0402.129358_1 LMJ.RY0402.129358 CDS 58 5.5
LMJ.RY0402.134375_1 LMJ.RY0402.134375 CDS 95 5.5
LMJ.RY0402.134375_2 LMJ.RY0402.134375 CDS 95 5.5
LMJ.RY0402.135081_1 LMJ.RY0402.135081 CDS 95 5.5
LMJ.RY0402.135081_2 LMJ.RY0402.135081 CDS 95 5.5
LMJ.RY0402.142112_1 LMJ.RY0402.142112 CDS 95 5.5
LMJ.RY0402.142112_2 LMJ.RY0402.142112 CDS 95 5.5
LMJ.RY0402.145989_1 LMJ.RY0402.145989 CDS 73 5.5
LMJ.RY0402.159286_2 LMJ.RY0402.159286 3'UTR 95 5.5
LMJ.RY0402.163220_1 LMJ.RY0402.163220 CDS 73 5.5
LMJ.RY0402.173847_1 LMJ.RY0402.173847 CDS 95 5.5
LMJ.RY0402.173847_2 LMJ.RY0402.173847 CDS 95 5.5
LMJ.RY0402.183768_1 LMJ.RY0402.183768 CDS 95 5.5
LMJ.RY0402.183768_2 LMJ.RY0402.183768 CDS 95 5.5
LMJ.RY0402.199483_1 LMJ.RY0402.199483 3'UTR 73 5.5
LMJ.RY0402.216477_2 LMJ.RY0402.216477 CDS 95 5.5
LMJ.RY0402.216477_3 LMJ.RY0402.216477 CDS 95 5.5
LMJ.RY0402.230762_1 LMJ.RY0402.230762 CDS 95 5.5
LMJ.RY0402.230762_2 LMJ.RY0402.230762 CDS 95 5.5

Gene Annotations

PFAM:PF00300
PANTHER: PTHR23029 PTHR23029:SF43
KEGG_ec:EC:3.1.3.63
KEGG_orthology:K15634
KOG:KOG0235
Gene ontology terms::
Best arabidopsis TAIR name:AT5G22620
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:phosphoglycerate/bisphosphoglycerate mutase family protein
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 3 of 11 ( 97% confidence (FDR = 0.021))
Carbon concentrating mechanism, screen 4 of 11 ( 94% confidence (FDR = 0.054))
Carbon concentrating mechanism, screen 5 of 11 ( 99% confidence (FDR = 0.00066))
Carbon concentrating mechanism, screen 10 of 11 ( 96% confidence (FDR = 0.035))
Carbon concentrating mechanism, screen 11 of 11 ( 86% confidence (FDR = 0.14))
High temperature, high CO2 in minimal media, screen 2 of 2 ( 71% confidence (FDR = 0.29))
Photosynthesis, screen 4 of 5 ( 86% confidence (FDR = 0.14))
Photosynthesis, screen 5 of 5 ( 96% confidence (FDR = 0.032))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.