Gene: Cre05.g235700
Overview
| Common name: | |
| Defline: | (1 of 2) K12382 - saposin (PSAP, SGP1) |
| Description: | |
| Synonyms: | g5419.t1,Cre05.g235700.t1.1 |
| Chromosome: | chromosome 5 |
Protein Localization
A plasmid for expressing Cre05.g235700 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre05.g235700-Venus-3xFLAG
Imaged strain: CSI_LW10F3
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
secretory pathway/lysosome
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.032787_1 | CLIP2.032787 | intron | 80 | 6.1 |
| CLIP2.062576_1 | CLIP2.062576 | 3'UTR | 80 | 6.1 |
| LMJ.RY0402.167521_1 | LMJ.RY0402.167521 | intron | 95 | 5.5 |
| LMJ.RY0402.167521_2 | LMJ.RY0402.167521 | CDS | 95 | 5.5 |
| LMJ.RY0402.205371_1 | LMJ.RY0402.205371 | intron | 73 | 5.5 |
| LMJ.RY0402.216061_1 | LMJ.RY0402.216061 | intron | 58 | 5.5 |
| LMJ.RY0402.225746_4 | LMJ.RY0402.225746 | CDS | 73 | 5.5 |
Gene Annotations
| PFAM: | PF03489, PF05184 |
| PANTHER: | PTHR11480 PTHR11480:SF3 |
| KEGG_ec: | |
| KEGG_orthology: | K12382 |
| KOG: | KOG1340 |
| Gene ontology terms:: | GO:0005764, GO:0006629, GO:0006665 |
| Best arabidopsis TAIR name: | AT5G01800 |
| Best arabidopsis TAIR symbol: | |
| Best arabidopsis TAIR defline: | saposin B domain-containing protein |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.