Gene: Cre10.g439350

Overview

Common name:
Defline:(1 of 3) PTHR17130:SF24 - GAN
Description:
Synonyms:Cre10.g439350.t1.1,g10819.t1
Chromosome:chromosome 10

Protein Localization

The plasmid for this gene is not available.

Imaged strain: CSI_FC2B10

Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 48 hours.

Classification(s):

chloroplast/not homogeneous/not pyrenoid depleted

If you reference these protein localization data in a manuscript, please cite: Mackinder et al. 2017.

Venus                      Venus+Chlorophyll

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.018382_1 CLIP2.018382 intron 80 6.1
CLIP2.018382_2 CLIP2.018382 intron 80 6.1
CLIP2.056443_1 CLIP2.056443 3'UTR 40 6.1
CLIP2.067230_1 CLIP2.067230 3'UTR 80 6.1
CLIP2.067230_2 CLIP2.067230 3'UTR 80 6.1
CLIP2.072620_1 CLIP2.072620 3'UTR 80 6.1
CLIP2.072620_2 CLIP2.072620 3'UTR 80 6.1
CLIP2.073473_1 CLIP2.073473 3'UTR 80 6.1
CLIP2.076513_1 CLIP2.076513 CDS 63 6.1
LMJ.RY0402.052609_1 LMJ.RY0402.052609 CDS 95 5.5
LMJ.RY0402.052609_2 LMJ.RY0402.052609 3'UTR 95 5.5
LMJ.RY0402.053081_1 LMJ.RY0402.053081 CDS 58 5.5
LMJ.RY0402.056757_1 LMJ.RY0402.056757 gene_edge/mRNA_edge/3'UTR 58 5.5
LMJ.RY0402.086785_1 LMJ.RY0402.086785 3'UTR 73 5.5
LMJ.RY0402.086834_2 LMJ.RY0402.086834 3'UTR 58 5.5
LMJ.RY0402.087520_2 LMJ.RY0402.087520 3'UTR 73 5.5
LMJ.RY0402.106186_1 LMJ.RY0402.106186 CDS 95 5.5
LMJ.RY0402.106186_2 LMJ.RY0402.106186 3'UTR 95 5.5
LMJ.RY0402.106523_1 LMJ.RY0402.106523 3'UTR 95 5.5
LMJ.RY0402.106523_2 LMJ.RY0402.106523 3'UTR 95 5.5
LMJ.RY0402.107831_3 LMJ.RY0402.107831 3'UTR 73 5.5
LMJ.RY0402.120899_2 LMJ.RY0402.120899 3'UTR 73 5.5
LMJ.RY0402.129099_1 LMJ.RY0402.129099 3'UTR 73 5.5
LMJ.RY0402.130334_1 LMJ.RY0402.130334 3'UTR 73 5.5
LMJ.RY0402.134518_1 LMJ.RY0402.134518 3'UTR 95 5.5
LMJ.RY0402.134862_1 LMJ.RY0402.134862 3'UTR 58 5.5
LMJ.RY0402.138705_1 LMJ.RY0402.138705 3'UTR 95 5.5
LMJ.RY0402.155803_1 LMJ.RY0402.155803 3'UTR 95 5.5
LMJ.RY0402.155803_2 LMJ.RY0402.155803 3'UTR 95 5.5
LMJ.RY0402.158543_1 LMJ.RY0402.158543 CDS 95 5.5
LMJ.RY0402.158543_2 LMJ.RY0402.158543 3'UTR 95 5.5
LMJ.RY0402.159061_1 LMJ.RY0402.159061 3'UTR 95 5.5
LMJ.RY0402.159061_2 LMJ.RY0402.159061 3'UTR 95 5.5
LMJ.RY0402.161662_1 LMJ.RY0402.161662 intron 73 5.5
LMJ.RY0402.179034_1 LMJ.RY0402.179034 CDS/intron 95 5.5
LMJ.RY0402.179034_2 LMJ.RY0402.179034 3'UTR 95 5.5
LMJ.RY0402.180079_1 LMJ.RY0402.180079 3'UTR 58 5.5
LMJ.RY0402.183458_1 LMJ.RY0402.183458 3'UTR 73 5.5
LMJ.RY0402.187066_1 LMJ.RY0402.187066 3'UTR 73 5.5
LMJ.RY0402.189334_1 LMJ.RY0402.189334 3'UTR 73 5.5
LMJ.RY0402.190201_2 LMJ.RY0402.190201 3'UTR 73 5.5
LMJ.RY0402.199226_1 LMJ.RY0402.199226 3'UTR 73 5.5
LMJ.RY0402.199379_1 LMJ.RY0402.199379 intron 95 5.5
LMJ.RY0402.199379_2 LMJ.RY0402.199379 3'UTR 95 5.5
LMJ.RY0402.201623_1 LMJ.RY0402.201623 3'UTR 73 5.5
LMJ.RY0402.216852_1 LMJ.RY0402.216852 3'UTR 73 5.5
LMJ.RY0402.217616_1 LMJ.RY0402.217616 3'UTR 73 5.5
LMJ.RY0402.218335_1 LMJ.RY0402.218335 3'UTR 73 5.5
LMJ.RY0402.229777_3 LMJ.RY0402.229777 3'UTR 73 5.5
LMJ.RY0402.235084_2 LMJ.RY0402.235084 3'UTR 73 5.5
LMJ.RY0402.237944_1 LMJ.RY0402.237944 3'UTR 95 5.5
LMJ.RY0402.237944_2 LMJ.RY0402.237944 3'UTR 95 5.5
LMJ.RY0402.242381_3 LMJ.RY0402.242381 3'UTR 73 5.5
LMJ.RY0402.244957_1 LMJ.RY0402.244957 3'UTR 73 5.5
LMJ.RY0402.254367_1 LMJ.RY0402.254367 3'UTR 73 5.5
LMJ.SG0182.012680_1 LMJ.SG0182.012680 3'UTR 75 5.3
LMJ.SG0182.019176_1 LMJ.SG0182.019176 3'UTR 75 5.3

Gene Annotations

PFAM:PF13414
PANTHER: PTHR17130 PTHR17130:SF24
KEGG_ec:
KEGG_orthology:
KOG:
Gene ontology terms::
Best arabidopsis TAIR name:AT1G55480.1
Best arabidopsis TAIR symbol:ZKT
Best arabidopsis TAIR defline:protein containing PDZ domain, a K-box domain, and a TPR region
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.