Gene: Cre12.g495951 (Genome version: v5.5)
Overview
| Common name: | CYN20-3,CYN8 |
| Defline: | |
| Description: | |
| Synonyms: | g12141.t2,Cre12.g496000.t2.1,CYN8, g12141.t1,Cre12.g496000.t1.3,CYN8 |
| Chromosome: | chromosome_12 |
Protein Localization
A plasmid for expressing Cre12.g495951 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g495951-Venus-3xFLAG
Imaged strain: CSI_LW01D9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in thylakoid
secretory pathway/endosome
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Orientation | Insertion Junction Feature | Confidence (%) |
|---|---|---|---|---|
| LMJ.RY0402.053853_1 | LMJ.RY0402.053853 | sense | 3'UTR | 95 |
| LMJ.RY0402.053853_2 | LMJ.RY0402.053853 | sense | 3'UTR | 95 |
| LMJ.RY0402.107467_1 | LMJ.RY0402.107467 | antisense | 3'UTR|outside_mRNA | 73 |
| LMJ.RY0402.109029_1 | LMJ.RY0402.109029 | sense | 3'UTR | 73 |
| LMJ.RY0402.126488_1 | LMJ.RY0402.126488 | sense | 3'UTR_intron|outside_mRNA | 95 |
| LMJ.RY0402.126488_2 | LMJ.RY0402.126488 | sense | 3'UTR_intron|outside_mRNA | 95 |
| LMJ.RY0402.139652_1 | LMJ.RY0402.139652 | sense | 3'UTR | 95 |
| LMJ.RY0402.139652_2 | LMJ.RY0402.139652 | sense | 3'UTR | 95 |
| LMJ.RY0402.154919_1 | LMJ.RY0402.154919 | sense | 3'UTR_intron|outside_mRNA | 73 |
| LMJ.RY0402.189870_1 | LMJ.RY0402.189870 | sense | 3'UTR_intron|outside_mRNA | 73 |
| LMJ.RY0402.204074_1 | LMJ.RY0402.204074 | antisense | 3'UTR|outside_mRNA | 73 |
| LMJ.RY0402.221954_1 | LMJ.RY0402.221954 | antisense | 3'UTR_intron|outside_mRNA | 73 |
Gene Annotations
| PFAM: | PF00160 |
| PANTHER: | PTHR11071 PTHR11071:SF60 |
| KEGG_ec: | |
| KEGG_orthology: | |
| KOG: | KOG0880 |
| Gene ontology terms:: | GO:0003755, GO:0006457 |
| Best arabidopsis TAIR name: | AT5G13120.1 |
| Best arabidopsis TAIR symbol: | ATCYP20-2,CYP20-2 |
| Best arabidopsis TAIR defline: | cyclophilin 20-2 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.