Gene: Cre12.g548400
Overview
| Common name: | LHCBM2 |
| Defline: | (1 of 3) K08913 - light-harvesting complex II chlorophyll a/b binding protein 2 (LHCB2); Light-harvesting protein of photosystem II |
| Description: | Encoding a light-harvesting antenna protein for PS2. This gene was reported under the name of LhcII-3 in PMID: 11522911 |
| Synonyms: | Cre12.g548400.t1.1,g13582.t1 |
| Chromosome: | chromosome 12 |
Protein Localization
A plasmid for expressing Cre12.g548400 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g548400-Venus-3xFLAG
Imaged strain: CSI_LW03E9
Imaging conditions: Tris-Phosphate media, air, 150 uM photons/m2/s, shaking in 96-well plate; imaged after 16 hours.
Classification(s):
chloroplast/not homogeneous/not pyrenoid depleted/enriched in stroma and around pyrenoid
If you reference these protein localization data in a manuscript, please cite: Wang et al. 2023.
 |  |  |  |
| Venus | Chlorophyll | Bright field | Merged |
Protein-Protein Interactions
We did not determine any protein-protein interactions for this gene.
Mutant Strains
| Insertion Junction | Mutant Strain | Insertion Junction Feature | Confidence (%) | Genome Version |
|---|---|---|---|---|
| CLIP2.001554_1 | CLIP2.001554 | intron | 80 | 6.1 |
| CLIP2.001554_2 | CLIP2.001554 | intron | 80 | 6.1 |
| CLIP2.003730_1 | CLIP2.003730 | intron | 80 | 6.1 |
| CLIP2.004533_1 | CLIP2.004533 | CDS | 80 | 6.1 |
| CLIP2.006786_1 | CLIP2.006786 | intron | 80 | 6.1 |
| CLIP2.007095_1 | CLIP2.007095 | CDS/5'UTR | 80 | 6.1 |
| CLIP2.007095_2 | CLIP2.007095 | CDS/5'UTR | 80 | 6.1 |
| CLIP2.007260_1 | CLIP2.007260 | CDS | 80 | 6.1 |
| CLIP2.007260_2 | CLIP2.007260 | CDS | 80 | 6.1 |
| CLIP2.007376_2 | CLIP2.007376 | 3'UTR | 80 | 6.1 |
| CLIP2.007417_2 | CLIP2.007417 | intron | 80 | 6.1 |
Gene Annotations
| PFAM: | PF00504 |
| PANTHER: | PTHR21649 PTHR21649:SF8 |
| KEGG_ec: | EC:1.10.3.9 |
| KEGG_orthology: | K08913 |
| KOG: | |
| Gene ontology terms:: | GO:0009765, GO:0016020 |
| Best arabidopsis TAIR name: | AT2G05100 |
| Best arabidopsis TAIR symbol: | LHCB2,LHCB2.2 |
| Best arabidopsis TAIR defline: | photosystem II light harvesting complex gene 2.1 |
| Phytozome Locus Page |
Phenotypes
Our phenotype screens did not find statistically significant results for this gene.