Gene: Cre13.g574000

Overview

Common name:	GEF1,CLV1
Defline:	Voltage-gated chloride channel; (1 of 1) PTHR11689:SF59 - CHLORIDE TRANSPORT PROTEIN 6
Description:	Voltage gated chloride channel. Previously annotated as GEF1
Synonyms:	CLV1,g14110.t1,GEF1
Chromosome:	chromosome 13

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Insertion Junction Feature	Confidence (%)	Genome Version
CLIP2.000135_1	CLIP2.000135	intron	80	6.1
CLIP2.000135_2	CLIP2.000135	intron	80	6.1
CLIP2.000263_2	CLIP2.000263	CDS	80	6.1
CLIP2.000263_3	CLIP2.000263	CDS	80	6.1
CLIP2.000367_1	CLIP2.000367	intron	80	6.1
CLIP2.000367_2	CLIP2.000367	intron	80	6.1
CLIP2.000764_1	CLIP2.000764	CDS	80	6.1
CLIP2.000764_2	CLIP2.000764	CDS	80	6.1
CLIP2.000913_1	CLIP2.000913	CDS	80	6.1
CLIP2.000913_2	CLIP2.000913	CDS	80	6.1
CLIP2.003752_2	CLIP2.003752	3'UTR	80	6.1
CLIP2.011861_1	CLIP2.011861	CDS	80	6.1
LMJ.RY0402.043796_1	LMJ.RY0402.043796	CDS	73	5.5
LMJ.RY0402.055768_1	LMJ.RY0402.055768	intron	73	5.5
LMJ.RY0402.059103_1	LMJ.RY0402.059103	intron	73	5.5
LMJ.RY0402.060579_1	LMJ.RY0402.060579	CDS	73	5.5
LMJ.RY0402.063011_1	LMJ.RY0402.063011	CDS	73	5.5
LMJ.RY0402.069952_1	LMJ.RY0402.069952	CDS	73	5.5
LMJ.RY0402.074542_1	LMJ.RY0402.074542	intron	73	5.5
LMJ.RY0402.094169_1	LMJ.RY0402.094169	intron	73	5.5
LMJ.RY0402.099338_1	LMJ.RY0402.099338	CDS	73	5.5
LMJ.RY0402.114272_1	LMJ.RY0402.114272	CDS	95	5.5
LMJ.RY0402.114272_2	LMJ.RY0402.114272	CDS	95	5.5
LMJ.RY0402.119853_1	LMJ.RY0402.119853	CDS/intron	73	5.5
LMJ.RY0402.137493_1	LMJ.RY0402.137493	CDS	95	5.5
LMJ.RY0402.137493_2	LMJ.RY0402.137493	CDS	95	5.5
LMJ.RY0402.256000_1	LMJ.RY0402.256000	CDS	73	5.5

Gene Annotations

PFAM:	PF00654
PANTHER:	PTHR11689 PTHR11689:SF59
KEGG_ec:
KEGG_orthology:
KOG:	KOG0474
Gene ontology terms::	GO:0005216, GO:0005247, GO:0006821, GO:0016020, GO:0055085
Best arabidopsis TAIR name:	AT5G26240.1
Best arabidopsis TAIR symbol:	ATCLC-D,CLC-D
Best arabidopsis TAIR defline:	chloride channel D
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Carbon concentrating mechanism, screen 1 of 11 ( 96% confidence (FDR = 0.036))

Carbon concentrating mechanism, screen 6 of 11 ( 99% confidence (FDR = 5.1e-05))

Carbon concentrating mechanism, screen 7 of 11 ( 99% confidence (FDR = 8e-06))

Carbon concentrating mechanism, screen 8 of 11 ( 99% confidence (FDR = 0.0055))

Carbon concentrating mechanism, screen 9 of 11 ( 87% confidence (FDR = 0.13))

High temperature, screen 1 of 7 ( 93% confidence (FDR = 0.067))

High temperature, screen 2 of 7 ( 97% confidence (FDR = 0.026))

Photosynthesis, screen 3 of 5 ( 98% confidence (FDR = 0.012))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.