Gene: Cre01.g038151

Overview

Common name:
Defline:(1 of 1) PTHR23069:SF0 - TAT-BINDING HOMOLOG 7
Description:
Synonyms:g854.t1,Cre01.g038150.t1.3
Chromosome:chromosome 1

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.014915_1 CLIP2.014915 intron 80 6.1
CLIP2.014915_2 CLIP2.014915 intron 80 6.1
CLIP2.017510_1 CLIP2.017510 intron 80 6.1
CLIP2.017510_2 CLIP2.017510 intron 80 6.1
CLIP2.018034_1 CLIP2.018034 intron 40 6.1
CLIP2.022552_1 CLIP2.022552 intron 80 6.1
CLIP2.022552_2 CLIP2.022552 intron 80 6.1
CLIP2.046598_1 CLIP2.046598 CDS 80 6.1
CLIP2.047091_1 CLIP2.047091 intron 80 6.1
CLIP2.047091_2 CLIP2.047091 intron 80 6.1
CLIP2.052331_1 CLIP2.052331 intron 80 6.1
CLIP2.052331_2 CLIP2.052331 intron 80 6.1
CLIP2.074133_1 CLIP2.074133 intron 63 6.1
CLIP2.078913_1 CLIP2.078913 intron 80 6.1
CLIP2.078913_2 CLIP2.078913 intron 80 6.1
LMJ.RY0402.046901_1 LMJ.RY0402.046901 intron 73 5.5
LMJ.RY0402.057665_1 LMJ.RY0402.057665 intron 73 5.5
LMJ.RY0402.087771_1 LMJ.RY0402.087771 CDS 73 5.5
LMJ.RY0402.114251_1 LMJ.RY0402.114251 CDS 95 5.5
LMJ.RY0402.114251_2 LMJ.RY0402.114251 CDS 95 5.5
LMJ.RY0402.117139_1 LMJ.RY0402.117139 intron 58 5.5
LMJ.RY0402.119029_1 LMJ.RY0402.119029 intron 73 5.5
LMJ.RY0402.127918_1 LMJ.RY0402.127918 intron 73 5.5
LMJ.RY0402.129694_1 LMJ.RY0402.129694 CDS 73 5.5
LMJ.RY0402.143358_1 LMJ.RY0402.143358 intron 58 5.5
LMJ.RY0402.155660_1 LMJ.RY0402.155660 intron 95 5.5
LMJ.RY0402.155660_2 LMJ.RY0402.155660 intron 95 5.5
LMJ.RY0402.161112_1 LMJ.RY0402.161112 intron 73 5.5
LMJ.RY0402.171042_1 LMJ.RY0402.171042 intron 73 5.5
LMJ.RY0402.171704_1 LMJ.RY0402.171704 intron 73 5.5
LMJ.RY0402.209124_1 LMJ.RY0402.209124 intron 95 5.5
LMJ.RY0402.209124_2 LMJ.RY0402.209124 intron 95 5.5
LMJ.RY0402.217737_1 LMJ.RY0402.217737 5'UTR 95 5.5
LMJ.RY0402.217737_2 LMJ.RY0402.217737 5'UTR 95 5.5
LMJ.RY0402.228800_1 LMJ.RY0402.228800 3'UTR 73 5.5
LMJ.RY0402.235294_1 LMJ.RY0402.235294 intron 73 5.5
LMJ.RY0402.252312_1 LMJ.RY0402.252312 intron 95 5.5
LMJ.RY0402.252312_2 LMJ.RY0402.252312 intron 95 5.5

Gene Annotations

PFAM:PF00439, PF07724
PANTHER: PTHR23069 PTHR23069:SF0
KEGG_ec:EC:3.6.1.3
KEGG_orthology:
KOG:KOG0737
Gene ontology terms::GO:0005515, GO:0005524
Best arabidopsis TAIR name:AT1G05910
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:cell division cycle protein 48-related / CDC48-related
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Cisplatin, screen 2 of 4 ( 85% confidence (FDR = 0.15))
Cisplatin, screen 4 of 4 ( 78% confidence (FDR = 0.22))
High temperature, screen 3 of 7 ( 97% confidence (FDR = 0.03))
High temperature, screen 5 of 7 ( 79% confidence (FDR = 0.21))
High temperature in minimal media, screen 1 of 1 ( 86% confidence (FDR = 0.14))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.