Gene: Cre02.g095200

Overview

Common name:
Defline:(1 of 3) PTHR19211:SF15 - ATP-BINDING CASSETTE SUB-FAMILY F MEMBER 2
Description:
Synonyms:Cre02.g095200.t1.1,g1932.t1
Chromosome:chromosome 2

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.014541_1 CLIP2.014541 5'UTR 80 6.1
CLIP2.014541_2 CLIP2.014541 5'UTR 80 6.1
CLIP2.023168_1 CLIP2.023168 CDS 80 6.1
CLIP2.023168_2 CLIP2.023168 CDS 80 6.1
CLIP2.026824_1 CLIP2.026824 CDS 80 6.1
CLIP2.026824_2 CLIP2.026824 CDS 80 6.1
CLIP2.032354_1 CLIP2.032354 CDS 80 6.1
CLIP2.032354_2 CLIP2.032354 CDS 80 6.1
CLIP2.033286_1 CLIP2.033286 CDS 80 6.1
CLIP2.033286_2 CLIP2.033286 CDS 80 6.1
CLIP2.046706_1 CLIP2.046706 CDS 80 6.1
CLIP2.046706_2 CLIP2.046706 CDS 80 6.1
CLIP2.048213_1 CLIP2.048213 CDS 80 6.1
CLIP2.048213_2 CLIP2.048213 CDS 80 6.1
CLIP2.072841_1 CLIP2.072841 5'UTR 80 6.1
CLIP2.072841_2 CLIP2.072841 5'UTR 80 6.1
LMJ.RY0402.066456_1 LMJ.RY0402.066456 CDS 73 5.5
LMJ.RY0402.091299_2 LMJ.RY0402.091299 5'UTR 95 5.5
LMJ.RY0402.116112_1 LMJ.RY0402.116112 CDS 95 5.5
LMJ.RY0402.116112_2 LMJ.RY0402.116112 CDS 95 5.5
LMJ.RY0402.132745_1 LMJ.RY0402.132745 intron 95 5.5
LMJ.RY0402.132745_2 LMJ.RY0402.132745 intron 95 5.5
LMJ.RY0402.133850_1 LMJ.RY0402.133850 intron 73 5.5
LMJ.RY0402.136357_1 LMJ.RY0402.136357 intron 95 5.5
LMJ.RY0402.136357_2 LMJ.RY0402.136357 intron 95 5.5
LMJ.RY0402.139558_1 LMJ.RY0402.139558 3'UTR 95 5.5
LMJ.RY0402.139558_2 LMJ.RY0402.139558 3'UTR 95 5.5
LMJ.RY0402.147047_2 LMJ.RY0402.147047 5'UTR 73 5.5
LMJ.RY0402.150205_1 LMJ.RY0402.150205 intron 95 5.5
LMJ.RY0402.150205_2 LMJ.RY0402.150205 intron 95 5.5
LMJ.RY0402.164878_1 LMJ.RY0402.164878 intron 95 5.5
LMJ.RY0402.164878_2 LMJ.RY0402.164878 intron 95 5.5
LMJ.RY0402.201743_1 LMJ.RY0402.201743 intron 95 5.5
LMJ.RY0402.201743_2 LMJ.RY0402.201743 intron 95 5.5
LMJ.RY0402.202173_1 LMJ.RY0402.202173 intron 95 5.5
LMJ.RY0402.202173_2 LMJ.RY0402.202173 intron 95 5.5
LMJ.RY0402.217571_1 LMJ.RY0402.217571 5'UTR 95 5.5
LMJ.RY0402.217571_2 LMJ.RY0402.217571 5'UTR 95 5.5
LMJ.RY0402.222491_1 LMJ.RY0402.222491 intron 73 5.5
LMJ.RY0402.229417_1 LMJ.RY0402.229417 CDS/intron 95 5.5
LMJ.RY0402.229417_2 LMJ.RY0402.229417 CDS/intron 95 5.5
LMJ.RY0402.238273_1 LMJ.RY0402.238273 intron 95 5.5
LMJ.RY0402.238273_2 LMJ.RY0402.238273 intron 95 5.5

Gene Annotations

PFAM:PF00005, PF12848
PANTHER: PTHR19211 PTHR19211:SF15
KEGG_ec:EC:3.6.1.3
KEGG_orthology:
KOG:KOG0062
Gene ontology terms::GO:0005524, GO:0016887, GO:0042309, GO:0050825, GO:0050826
Best arabidopsis TAIR name:AT1G64550.1
Best arabidopsis TAIR symbol:ATGCN3,GCN3
Best arabidopsis TAIR defline:general control non-repressible 3
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 1 of 6 ( 72% confidence (FDR = 0.28))
Paromomycin, screen 4 of 6 ( 79% confidence (FDR = 0.21))
Paromomycin, screen 5 of 6 ( 78% confidence (FDR = 0.22))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.