Gene: Cre09.g403800

Overview

Common name:ODA4,ROC30,DYHB,DHC14,ODA-DHCbeta,ROC54
Defline:Flagellar outer arm dynein heavy chain beta; (1 of 2) PTHR10676//PTHR10676:SF36 - DYNEIN HEAVY CHAIN FAMILY PROTEIN // SUBFAMILY NOT NAMED
Description:Locus first identified by mutations (sup-pf-1 alleles) that suppress flagellar paralysis from radial spoke or central pair defects; null mutations block ODA assembly; Matsuo et al.'s (2008) roc30 (rhythm of chloroplast 30) and roc54 circadian bioluminescence rhythm mutant loci map here
Synonyms:ROC54,g9185.t1,Cre09.g403800.t1.1,ROC30,ODA4,ODA-DHCbeta,DYHB
Chromosome:chromosome 9

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID Bait Name Prey ID Prey Name Reference
Cre06.g278195 CTI,CTI1 Cre09.g403800 ODA4,ROC30,DYHB,DHC14,ODA-DHCbeta,ROC54 Wang et al. 2023

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.009739_1 CLIP2.009739 CDS 80 6.1
CLIP2.009739_2 CLIP2.009739 CDS 80 6.1
CLIP2.025318_1 CLIP2.025318 CDS 80 6.1
CLIP2.025318_2 CLIP2.025318 CDS 80 6.1
CLIP2.028538_1 CLIP2.028538 CDS 80 6.1
CLIP2.028538_2 CLIP2.028538 CDS 80 6.1
CLIP2.028701_1 CLIP2.028701 CDS 80 6.1
CLIP2.028701_2 CLIP2.028701 CDS 80 6.1
CLIP2.036026_1 CLIP2.036026 CDS 80 6.1
CLIP2.036026_2 CLIP2.036026 CDS 80 6.1
CLIP2.046027_1 CLIP2.046027 5'UTR 80 6.1
CLIP2.046027_2 CLIP2.046027 5'UTR 80 6.1
LMJ.RY0402.051071_1 LMJ.RY0402.051071 CDS 95 5.5
LMJ.RY0402.051071_2 LMJ.RY0402.051071 CDS 95 5.5
LMJ.RY0402.065510_1 LMJ.RY0402.065510 CDS 95 5.5
LMJ.RY0402.065510_2 LMJ.RY0402.065510 CDS 95 5.5
LMJ.RY0402.066292_1 LMJ.RY0402.066292 intron 73 5.5
LMJ.RY0402.100318_1 LMJ.RY0402.100318 CDS 73 5.5
LMJ.RY0402.116806_1 LMJ.RY0402.116806 intron 73 5.5
LMJ.RY0402.135449_2 LMJ.RY0402.135449 CDS 95 5.5
LMJ.RY0402.135449_3 LMJ.RY0402.135449 CDS 95 5.5
LMJ.RY0402.135908_1 LMJ.RY0402.135908 CDS 73 5.5
LMJ.RY0402.147229_1 LMJ.RY0402.147229 CDS 95 5.5
LMJ.RY0402.147229_2 LMJ.RY0402.147229 CDS 95 5.5
LMJ.RY0402.161080_1 LMJ.RY0402.161080 intron 95 5.5
LMJ.RY0402.161080_2 LMJ.RY0402.161080 intron 95 5.5
LMJ.RY0402.170786_1 LMJ.RY0402.170786 CDS 95 5.5
LMJ.RY0402.170786_2 LMJ.RY0402.170786 CDS 95 5.5
LMJ.RY0402.211830_1 LMJ.RY0402.211830 CDS 73 5.5
LMJ.RY0402.219441_1 LMJ.RY0402.219441 CDS 95 5.5
LMJ.RY0402.219441_2 LMJ.RY0402.219441 CDS 95 5.5
LMJ.RY0402.228583_1 LMJ.RY0402.228583 CDS 73 5.5
LMJ.RY0402.248118_1 LMJ.RY0402.248118 CDS 73 5.5

Gene Annotations

PFAM:PF03028, PF07728, PF08385, PF08393, PF12774, PF12775, PF12777, PF12780, PF12781
PANTHER: PTHR10676 PTHR10676:SF36
KEGG_ec:EC:3.6.4.2
KEGG_orthology:K10408
KOG:KOG3595
Gene ontology terms::GO:0003777, GO:0005524, GO:0007018, GO:0016887, GO:0030286
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Flagella, screen 1 of 6 ( 99% confidence (FDR = 0.0036))
Flagella, screen 2 of 6 ( 92% confidence (FDR = 0.079))
Flagella, screen 3 of 6 ( 99% confidence (FDR = 0.0065))
Flagella, screen 4 of 6 ( 99% confidence (FDR = 0.0023))
Flagella, screen 5 of 6 ( 93% confidence (FDR = 0.068))
Flagella, screen 6 of 6 ( 99% confidence (FDR = 0.0017))
Paromomycin, screen 3 of 6 ( 98% confidence (FDR = 0.017))
Paromomycin, screen 4 of 6 ( 86% confidence (FDR = 0.14))
Paromomycin, screen 5 of 6 ( 92% confidence (FDR = 0.071))
Paromomycin, screen 6 of 6 ( 89% confidence (FDR = 0.11))
Photosynthesis or light sensitivity, screen 1 of 12 ( 96% confidence (FDR = 0.036))
Predator, screen 4 of 11 ( 87% confidence (FDR = 0.13))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.