Gene: Cre12.g549550

Overview

Common name:TUB2,RSP19
Defline:(1 of 2) K07375 - tubulin beta (TUBB); beta-2 tubulin
Description:GI:167458; major constituent of microtubules [PMID: 3460413, PMID: 6098820]; it binds one mole of GTP that is hydrolyzed and alters dynamic instability of the microtubule cytoskeleton; ts-lethal mutant block at S/M (PMID 29743196)
Synonyms:g13557.t1,RSP19,Cre12.g549550.t1.1
Chromosome:chromosome 12

Protein Localization

A plasmid for expressing Cre12.g549550 tagged with the fluorescent protein Venus and affinity epitope 3xFLAG is available: pLM005-Cre12.g549550-Venus-3xFLAG

No localization data is available in our datasets for this protein.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.005038_1 CLIP2.005038 5'UTR 63 6.1
CLIP2.018714_3 CLIP2.018714 3'UTR 80 6.1
CLIP2.022174_1 CLIP2.022174 CDS 80 6.1
CLIP2.022174_2 CLIP2.022174 CDS 80 6.1
CLIP2.036489_2 CLIP2.036489 CDS 80 6.1
CLIP2.038176_1 CLIP2.038176 CDS 80 6.1
CLIP2.038176_2 CLIP2.038176 CDS 80 6.1
CLIP2.039464_2 CLIP2.039464 intron 80 6.1
CLIP2.042600_1 CLIP2.042600 CDS 80 6.1
CLIP2.042600_2 CLIP2.042600 CDS 80 6.1
CLIP2.050455_2 CLIP2.050455 CDS/5'UTR 63 6.1
CLIP2.051610_3 CLIP2.051610 5'UTR 80 6.1
CLIP2.051614_2 CLIP2.051614 CDS 80 6.1
CLIP2.051614_3 CLIP2.051614 CDS 80 6.1
CLIP2.052594_1 CLIP2.052594 CDS 80 6.1
CLIP2.052594_2 CLIP2.052594 CDS 80 6.1
CLIP2.058036_2 CLIP2.058036 5'UTR 63 6.1
CLIP2.064870_3 CLIP2.064870 CDS 80 6.1
CLIP2.068438_1 CLIP2.068438 CDS 80 6.1
CLIP2.072268_3 CLIP2.072268 intron 80 6.1
CLIP2.073885_2 CLIP2.073885 3'UTR 40 6.1
CLIP2.076513_2 CLIP2.076513 intron 80 6.1
CLIP2.077352_1 CLIP2.077352 5'UTR 80 6.1
CLIP2.077694_3 CLIP2.077694 5'UTR 80 6.1
CLIP2.078743_1 CLIP2.078743 5'UTR 80 6.1
LMJ.RY0402.051197_1 LMJ.RY0402.051197 CDS 73 5.5
LMJ.RY0402.051434_1 LMJ.RY0402.051434 5'UTR 95 5.5
LMJ.RY0402.051434_2 LMJ.RY0402.051434 5'UTR 95 5.5
LMJ.RY0402.058528_2 LMJ.RY0402.058528 5'UTR 73 5.5
LMJ.RY0402.062614_1 LMJ.RY0402.062614 3'UTR 95 5.5
LMJ.RY0402.062614_2 LMJ.RY0402.062614 3'UTR 95 5.5
LMJ.RY0402.065283_1 LMJ.RY0402.065283 intron 95 5.5
LMJ.RY0402.065283_2 LMJ.RY0402.065283 intron 95 5.5
LMJ.RY0402.071824_1 LMJ.RY0402.071824 5'UTR 73 5.5
LMJ.RY0402.075388_1 LMJ.RY0402.075388 CDS 95 5.5
LMJ.RY0402.075388_2 LMJ.RY0402.075388 CDS 95 5.5
LMJ.RY0402.082742_1 LMJ.RY0402.082742 intron 73 5.5
LMJ.RY0402.101686_2 LMJ.RY0402.101686 5'UTR 73 5.5
LMJ.RY0402.110059_2 LMJ.RY0402.110059 CDS 58 5.5
LMJ.RY0402.111052_1 LMJ.RY0402.111052 intron 95 5.5
LMJ.RY0402.111052_2 LMJ.RY0402.111052 intron 95 5.5
LMJ.RY0402.120351_1 LMJ.RY0402.120351 CDS 95 5.5
LMJ.RY0402.120351_2 LMJ.RY0402.120351 CDS 95 5.5
LMJ.RY0402.135035_1 LMJ.RY0402.135035 intron 95 5.5
LMJ.RY0402.135035_2 LMJ.RY0402.135035 CDS 95 5.5
LMJ.RY0402.138694_1 LMJ.RY0402.138694 CDS 58 5.5
LMJ.RY0402.141308_1 LMJ.RY0402.141308 5'UTR 95 5.5
LMJ.RY0402.143602_1 LMJ.RY0402.143602 intron 95 5.5
LMJ.RY0402.143602_2 LMJ.RY0402.143602 CDS 95 5.5
LMJ.RY0402.144372_3 LMJ.RY0402.144372 gene_edge/mRNA_edge/5'UTR 95 5.5
LMJ.RY0402.151103_3 LMJ.RY0402.151103 5'UTR 73 5.5
LMJ.RY0402.158291_1 LMJ.RY0402.158291 CDS 73 5.5
LMJ.RY0402.160945_1 LMJ.RY0402.160945 intron 95 5.5
LMJ.RY0402.160945_2 LMJ.RY0402.160945 CDS 95 5.5
LMJ.RY0402.168619_5 LMJ.RY0402.168619 3'UTR 58 5.5
LMJ.RY0402.188276_1 LMJ.RY0402.188276 5'UTR 73 5.5
LMJ.RY0402.193473_1 LMJ.RY0402.193473 3'UTR 95 5.5
LMJ.RY0402.193473_2 LMJ.RY0402.193473 3'UTR 95 5.5
LMJ.RY0402.198193_1 LMJ.RY0402.198193 5'UTR 73 5.5
LMJ.RY0402.199681_1 LMJ.RY0402.199681 5'UTR 73 5.5
LMJ.RY0402.204252_2 LMJ.RY0402.204252 5'UTR 73 5.5
LMJ.RY0402.226580_1 LMJ.RY0402.226580 intron 95 5.5
LMJ.RY0402.226580_2 LMJ.RY0402.226580 intron 95 5.5
LMJ.RY0402.226936_1 LMJ.RY0402.226936 intron 73 5.5
LMJ.RY0402.231164_1 LMJ.RY0402.231164 intron 95 5.5
LMJ.RY0402.231164_2 LMJ.RY0402.231164 CDS 95 5.5
LMJ.RY0402.236858_5 LMJ.RY0402.236858 intron 58 5.5
LMJ.RY0402.240911_1 LMJ.RY0402.240911 intron 95 5.5
LMJ.RY0402.240911_2 LMJ.RY0402.240911 CDS 95 5.5
LMJ.RY0402.252747_2 LMJ.RY0402.252747 5'UTR 95 5.5
LMJ.RY0402.252747_3 LMJ.RY0402.252747 5'UTR 95 5.5
LMJ.RY0402.253462_1 LMJ.RY0402.253462 CDS 95 5.5
LMJ.RY0402.253462_2 LMJ.RY0402.253462 CDS 95 5.5

Gene Annotations

PFAM:PF00091, PF03953
PANTHER: PTHR11588 PTHR11588:SF72
KEGG_ec:EC:2.4.2.1
KEGG_orthology:K07375
KOG:KOG1375
Gene ontology terms::GO:0000930, GO:0003924, GO:0005200, GO:0005525, GO:0005874, GO:0007017, GO:0007020, GO:0031122, GO:0043234, GO:0051258
Best arabidopsis TAIR name:AT5G62700
Best arabidopsis TAIR symbol:TUB2
Best arabidopsis TAIR defline:tubulin beta chain 3
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Low Termperature, screen 1 of 1 ( 73% confidence (FDR = 0.27))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.