Gene: Cre04.g229550

Overview

Common name:SRR15
Defline:Scavenger receptor cysteine rich (SRCR) protein; (1 of 5) 1.4.3.13 - Protein-lysine 6-oxidase / Lysyl oxidase
Description:Contains C-terminal Transient receptor potential (TRP) ion channel domain; null-allele mutant was isolated (PMID 29743196)
Synonyms:SRR15,g5029.t1
Chromosome:chromosome 4

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction Mutant Strain Insertion Junction Feature Confidence (%) Genome Version
CLIP2.003222_1 CLIP2.003222 CDS 80 6.1
CLIP2.003222_2 CLIP2.003222 CDS 80 6.1
CLIP2.004653_1 CLIP2.004653 CDS 80 6.1
CLIP2.005070_1 CLIP2.005070 CDS 80 6.1
CLIP2.005070_2 CLIP2.005070 CDS 80 6.1
CLIP2.005408_1 CLIP2.005408 CDS 80 6.1
CLIP2.005408_2 CLIP2.005408 CDS 80 6.1
CLIP2.005824_1 CLIP2.005824 CDS 80 6.1
CLIP2.005995_1 CLIP2.005995 CDS 80 6.1
CLIP2.005995_2 CLIP2.005995 CDS 80 6.1
CLIP2.067609_1 CLIP2.067609 intron 40 6.1
LMJ.RY0402.045932_1 LMJ.RY0402.045932 CDS 95 5.5
LMJ.RY0402.045932_2 LMJ.RY0402.045932 CDS 95 5.5
LMJ.RY0402.050812_1 LMJ.RY0402.050812 intron 95 5.5
LMJ.RY0402.050812_2 LMJ.RY0402.050812 intron 95 5.5
LMJ.RY0402.053592_1 LMJ.RY0402.053592 CDS 73 5.5
LMJ.RY0402.090806_1 LMJ.RY0402.090806 intron 95 5.5
LMJ.RY0402.090806_2 LMJ.RY0402.090806 intron 95 5.5
LMJ.RY0402.128402_1 LMJ.RY0402.128402 intron 95 5.5
LMJ.RY0402.128402_2 LMJ.RY0402.128402 intron 95 5.5
LMJ.RY0402.133502_1 LMJ.RY0402.133502 CDS 95 5.5
LMJ.RY0402.133502_2 LMJ.RY0402.133502 CDS 95 5.5
LMJ.RY0402.139882_1 LMJ.RY0402.139882 intron 95 5.5
LMJ.RY0402.139882_2 LMJ.RY0402.139882 intron 95 5.5
LMJ.RY0402.147117_1 LMJ.RY0402.147117 3'UTR 73 5.5
LMJ.RY0402.149865_1 LMJ.RY0402.149865 CDS 73 5.5
LMJ.RY0402.164208_1 LMJ.RY0402.164208 CDS 95 5.5
LMJ.RY0402.164208_2 LMJ.RY0402.164208 CDS 95 5.5
LMJ.RY0402.176928_1 LMJ.RY0402.176928 CDS 73 5.5
LMJ.RY0402.205326_1 LMJ.RY0402.205326 intron 95 5.5
LMJ.RY0402.205326_2 LMJ.RY0402.205326 intron 95 5.5
LMJ.RY0402.218414_1 LMJ.RY0402.218414 CDS 73 5.5
LMJ.RY0402.245309_1 LMJ.RY0402.245309 CDS 73 5.5
LMJ.SG0182.002966_1 LMJ.SG0182.002966 intron 75 5.3
LMJ.SG0182.014284_1 LMJ.SG0182.014284 intron 75 5.3

Gene Annotations

PFAM:PF00530, PF06011
PANTHER: PTHR19862 PTHR19862:SF14
KEGG_ec:EC:1.4.3.13
KEGG_orthology:
KOG:
Gene ontology terms::GO:0005044, GO:0016020
Best arabidopsis TAIR name:
Best arabidopsis TAIR symbol:
Best arabidopsis TAIR defline:
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Photosynthesis, screen 3 of 5 ( 75% confidence (FDR = 0.25))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.