Gene: Cre14.g613950 (Genome version: v5.5)

Overview

Common name:	ABC2
Defline:
Description:
Synonyms:	g14793.t1,ABC2, g14793.t2,Cre14.g613950.t1.1,ABC2
Chromosome:	chromosome_14

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

Bait ID	Bait Name	Prey ID	Prey Name	Reference
Cre02.g097800	HLA3,MRP1	Cre14.g613950	ABC2

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.RY0402.061536_2	LMJ.RY0402.061536	antisense	3'UTR	73
LMJ.RY0402.085740_1	LMJ.RY0402.085740	sense	intron	73
LMJ.RY0402.097614_1	LMJ.RY0402.097614	antisense	intron	73
LMJ.RY0402.129521_1	LMJ.RY0402.129521	sense	CDS	95
LMJ.RY0402.129521_2	LMJ.RY0402.129521	sense	CDS	95
LMJ.RY0402.147678_1	LMJ.RY0402.147678	sense	intron	95
LMJ.RY0402.147678_2	LMJ.RY0402.147678	sense	intron	95
LMJ.RY0402.149224_1	LMJ.RY0402.149224	antisense	intron	73
LMJ.RY0402.160375_2	LMJ.RY0402.160375	sense	intron	95
LMJ.RY0402.160375_3	LMJ.RY0402.160375	sense	intron	95
LMJ.RY0402.178253_2	LMJ.RY0402.178253	sense	intron	95
LMJ.RY0402.178253_3	LMJ.RY0402.178253	sense	intron	95
LMJ.RY0402.209861_1	LMJ.RY0402.209861	sense	CDS	95
LMJ.RY0402.209861_2	LMJ.RY0402.209861	sense	intron	95
LMJ.RY0402.219787_1	LMJ.RY0402.219787	sense	3'UTR	95
LMJ.RY0402.219787_2	LMJ.RY0402.219787	sense	3'UTR	95
LMJ.RY0402.220543_1	LMJ.RY0402.220543	sense	intron	95
LMJ.RY0402.220543_2	LMJ.RY0402.220543	sense	intron	95
LMJ.RY0402.229720_1	LMJ.RY0402.229720	sense	intron	73
LMJ.RY0402.234807_1	LMJ.RY0402.234807	antisense	intron	73
LMJ.RY0402.237847_2	LMJ.RY0402.237847	antisense	intron	73
LMJ.RY0402.238034_1	LMJ.RY0402.238034	sense	3'UTR	73

Gene Annotations

PFAM:	PF00005
PANTHER:	PTHR19229 PTHR19229:SF72
KEGG_ec:
KEGG_orthology:
KOG:	KOG0059
Gene ontology terms::	GO:0005524, GO:0016887
Best arabidopsis TAIR name:	AT3G47730.1
Best arabidopsis TAIR symbol:	ABCA2,ATATH1,ATH1
Best arabidopsis TAIR defline:	ATP-binding cassette A2
Phytozome Locus Page

Phenotypes

Mutants in this gene exhibit a phenotype under the following conditions:

Paromomycin, screen 6 of 6 ( 79% confidence (FDR = 0.21))

Note: FDR indicates the likelihood that a particular genotype-phenotype relationship is incorrect. Not all mutants in a particular gene show the same phenotype. Please see the mutant pages for each mutant's phenotypes. Complementation is needed to definitively prove a genotype-phenotype link. These data are from a pooled phenotyping experiment.

If you reference the phenotypic data above in a manuscript, please cite: Fauser et al. 2022 Nature Genetics.

Gene: Cre14.g613950 (Genome version: v5.3)

Overview

Common name:
Defline:
Description:
Synonyms:	g14793,Cre14.g613950
Chromosome:	chromosome_14

Protein Localization

We did not create a plasmid for this gene.

Protein-Protein Interactions

We did not determine any protein-protein interactions for this gene.

Mutant Strains

Insertion Junction	Mutant Strain	Orientation	Insertion Junction Feature	Confidence (%)
LMJ.SG0182.008667_1	LMJ.SG0182.008667	sense	MULTIPLE_SPLICE_VARIANTS	75

Gene Annotations

PFAM:	PF00005
PANTHER:	PTHR19229 PTHR19229:SF72
KEGG_ec:
KEGG_orthology:
KOG:	KOG0059
Gene ontology terms::
Best arabidopsis TAIR name:	AT3G47730.1
Best arabidopsis TAIR symbol:	ABCA2,ATATH1,ATH1
Best arabidopsis TAIR defline:	ATP-binding cassette A2
Phytozome Locus Page

Phenotypes

Our phenotype screens did not find statistically significant results for this gene.